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SCN18_30_10_14_R2_B_scaffold_1608

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_1608_1
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(244..771)
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI000372BA8A
signal transduction histidine kinase with CheB and CheR activity
Signal transduction histidine kinase with CheB and CheR activity {ECO:0000313|EMBL:ACU61866.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCN18_30_10_14_R2_B_scaffold_1608_2
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(764..3487)
DNA (2724bp) protein (908aa)
putative PAS/PAC sensor protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C469F
Putative chemotaxis CheB/CheR fusion protein {ECO:0000313|EMBL:GAO39537.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
PAS sensor protein
SCN18_30_10_14_R2_B_scaffold_1608_3
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3993..5465
DNA (1473bp) protein (491aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4B27
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1608_4
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5500..6576)
DNA (1077bp) protein (359aa)
SCN18_30_10_14_R2_B_scaffold_1608_5
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6669..7841)
DNA (1173bp) protein (391aa)
spore coat protein H n=2 Tax=Gemmata obscuriglobus RepID=UPI00016C4C85
spore coat protein H
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
SCN18_30_10_14_R2_B_scaffold_1608_6
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7856..8530)
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3B17
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB18115.1}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
SCN18_30_10_14_R2_B_scaffold_1608_trna_1
unknown

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8657..8730
DNA (74bp)
transferRNA Val
SCN18_30_10_14_R2_B_scaffold_1608_7
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8864..9961
DNA (1098bp) protein (366aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002EAC570
Phage-related integrase {ECO:0000313|EMBL:EAQ79456.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1608_8
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10941..11450
DNA (510bp) protein (170aa)
SCN18_30_10_14_R2_B_scaffold_1608_9
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11480..11701)
DNA (222bp) protein (74aa)
SCN18_30_10_14_R2_B_scaffold_1608_10
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11784..12125)
DNA (342bp) protein (114aa)
SCN18_30_10_14_R2_B_scaffold_1608_11
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12182..12460)
DNA (279bp) protein (93aa)
SCN18_30_10_14_R2_B_scaffold_1608_12
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12457..13323)
DNA (867bp) protein (289aa)
SCN18_30_10_14_R2_B_scaffold_1608_13
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13349..13600)
DNA (252bp) protein (84aa)
SCN18_30_10_14_R2_B_scaffold_1608_14
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13613..14134)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Psychrobacter aquaticus CMS 56 RepID=U4T8B1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ERL54964.1}; TaxID=1354303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter aquaticus CMS 56.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1608_15
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14191..14988)
DNA (798bp) protein (266aa)
Putative uncharacterized protein n=1 Tax=Daphnia pulex RepID=E9I2E6_DAPPU
Putative uncharacterized protein {ECO:0000313|EMBL:EFX61833.1}; TaxID=6669 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Branchiopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia.;" source="Daphnia pulex (Water flea).;"
SCN18_30_10_14_R2_B_scaffold_1608_16
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14992..15711)
DNA (720bp) protein (240aa)
SCN18_30_10_14_R2_B_scaffold_1608_17
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15714..16151)
DNA (438bp) protein (146aa)
SCN18_30_10_14_R2_B_scaffold_1608_18
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16179..16784)
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5851
SCN18_30_10_14_R2_B_scaffold_1608_19
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17002..18186)
DNA (1185bp) protein (395aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002D2A184
group 1 glycosyl transferase
Displaying 20 items

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