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SCN18_30_10_14_R2_B_scaffold_1932

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_1932_1
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(56..166)
DNA (111bp) protein (37aa)
ATPase and permease component n=1 Tax=Paenibacillus popilliae ATCC 14706 RepID=M9M462_PAEPP
ABC transporter ATP-binding protein
ATPase and permease component {ECO:0000313|EMBL:GAC43869.1}; TaxID=1212764 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus popilliae ATCC 14706.;"
SCN18_30_10_14_R2_B_scaffold_1932_2
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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529..1029
DNA (501bp) protein (167aa)
Transposase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C58D0
SCN18_30_10_14_R2_B_scaffold_1932_3
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1268..2449)
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C586A
polysaccharide export protein
Tax=RBG_13_Planctomycetes_63_9_curated
SCN18_30_10_14_R2_B_scaffold_1932_4
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2486..3352)
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5869
Uncharacterized protein {ECO:0000313|EMBL:EID15715.1}; TaxID=1150591 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium xenopi RIVM700367.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1932_5
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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3621..3920
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6AX94_PSERE
histone
Histone {ECO:0000313|EMBL:AKC68396.1}; TaxID=573737 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea oxalativorans.;"
SCN18_30_10_14_R2_B_scaffold_1932_6
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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4519..4989
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C452C
SCN18_30_10_14_R2_B_scaffold_1932_7
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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5124..5603
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C452B
SCN18_30_10_14_R2_B_scaffold_1932_8
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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5814..9011
DNA (3198bp) protein (1066aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJU4_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE67527.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
SCN18_30_10_14_R2_B_scaffold_1932_9
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9203..10231
DNA (1029bp) protein (343aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
ribosomal large subunit pseudouridine synthase B n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3D27
pseudouridine synthase
SCN18_30_10_14_R2_B_scaffold_1932_10
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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10258..11067
DNA (810bp) protein (270aa)
dihydroorotate dehydrogenase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3D26
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
oxidoreductase FAD/NAD(P)-binding domain-containing protein
SCN18_30_10_14_R2_B_scaffold_1932_11
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11090..11338
DNA (249bp) protein (83aa)
SCN18_30_10_14_R2_B_scaffold_1932_12
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11401..12162)
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4492
SCN18_30_10_14_R2_B_scaffold_1932_13
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12405..13346
DNA (942bp) protein (314aa)
general secretion pathway protein-related protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4493
AAA ATPase
AAA ATPase {ECO:0000313|EMBL:AEH45740.1}; TaxID=667014 species="Bacteria; Thermodesulfobacteria; Thermodesulfobacteriales; Thermodesulfobacteriaceae; Thermodesulfatator.;" source="Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812).;"
SCN18_30_10_14_R2_B_scaffold_1932_14
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13402..14415
DNA (1014bp) protein (338aa)
Tyrosine-protein kinase (capsular polysaccharide biosynthesis) n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4494
gumC; Capsular polysaccharide synthesis enzyme cpsD fused to Mrp family ATPase
Capsular polysaccharide synthesis enzyme cpsD fused to Mrp family ATPase {ECO:0000313|EMBL:ACD82626.1}; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum; (strain V4)).;"
SCN18_30_10_14_R2_B_scaffold_1932_15
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14455..15378
DNA (924bp) protein (308aa)
WD-40 repeat protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3D47
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49280.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
WD-40 repeat-containing protein
SCN18_30_10_14_R2_B_scaffold_1932_16
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15382..15486)
DNA (105bp) protein (35aa)
SCN18_30_10_14_R2_B_scaffold_1932_17
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16035..22484
DNA (6450bp) protein (2150aa)
hypothetical protein, partial n=1 Tax=Zavarzinella formosa RepID=UPI000379CD49
type II and III secretion system protein
Type II and III secretion system protein {ECO:0000313|EMBL:ADB18323.1}; Flags: Precursor;; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
Displaying 17 items

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