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SCN18_30_10_14_R2_B_scaffold_1944

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_1944_1
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..950)
DNA (948bp) protein (316aa)
ribonuclease E n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C589D
ribonuclease G and E
Ribonuclease G and E {ECO:0000313|EMBL:AGA27530.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1944_2
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1042..1821)
DNA (780bp) protein (260aa)
Fe-S oxidoreductase, partial n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C589E
Fe-S oxidoreductase {ECO:0000313|EMBL:BAL53688.1}; TaxID=120965 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; environmental samples.;" source="uncultured planctomycete.;"
radical SAM-linked protein
SCN18_30_10_14_R2_B_scaffold_1944_3
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

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comp(2001..3767)
DNA (1767bp) protein (589aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=120965 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; environmental samples.;" source="uncultured planctomycete.;"
phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C56F8
phosphoenolpyruvate-protein phosphotransferase
SCN18_30_10_14_R2_B_scaffold_1944_4
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3803..4144)
DNA (342bp) protein (114aa)
sugar transport PTS system phosphocarrier protein HPR n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C56F9
phosphoenolpyruvate-protein phosphotransferase
Tax=RBG_16_RIF_CHLX_70_13_curated
SCN18_30_10_14_R2_B_scaffold_1944_5
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4190..4732)
DNA (543bp) protein (181aa)
fruA; PTS system, fructose-specific enzyme II, BC component (EC:2.7.1.69)
PTS fructose transporter subunit IIA n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C56FA
PTS system, fructose-specific IIA component {ECO:0000313|EMBL:BAL53691.1}; TaxID=120965 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; environmental samples.;" source="uncultured planctomycete.;"
SCN18_30_10_14_R2_B_scaffold_1944_6
uncultured planctomycete, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(4735..5070)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C56FB
30S ribosomal protein S30 {ECO:0000313|EMBL:BAL53692.1}; TaxID=120965 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; environmental samples.;" source="uncultured planctomycete.;"
ribosomal subunit interface protein
SCN18_30_10_14_R2_B_scaffold_1944_7
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(5227..6579)
DNA (1353bp) protein (451aa)
membrane protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5765
transmembrane protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
SCN18_30_10_14_R2_B_scaffold_1944_8
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

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comp(6590..7381)
DNA (792bp) protein (264aa)
Putative uncharacterized protein id=4092238 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RBG_16_Acidobacteria_68_9_curated
SCN18_30_10_14_R2_B_scaffold_1944_9
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(7427..8002)
DNA (576bp) protein (192aa)
protein translation elongation factor P (EF-P) n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4FE9
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
translation elongation factor P
SCN18_30_10_14_R2_B_scaffold_1944_10
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

8155..10188
DNA (2034bp) protein (678aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4FE8
Uncharacterized protein {ECO:0000313|EMBL:EDL61671.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1944_11
SCNpilot_BF_INOC_Sphingobacteriales_46_9, SCNpilot_BF_INOC_Sphingobacteriales_46_9, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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10236..11990
DNA (1755bp) protein (585aa)
alkaline phosphatase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4FE7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEP11237.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
SCN18_30_10_14_R2_B_scaffold_1944_12
unknown

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comp(12071..12508)
DNA (438bp) protein (146aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1944_13
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(12771..14348)
DNA (1578bp) protein (526aa)
serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4C4A
D-alanyl-D-alanine carboxypeptidase
D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family {ECO:0000313|EMBL:AGA30726.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1944_14
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

14491..15273
DNA (783bp) protein (261aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
imidazole glycerol phosphate synthase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4BD0
Imidazole glycerol phosphate synthase cyclase subunit
SCN18_30_10_14_R2_B_scaffold_1944_15
SCNPILOT_CONT_750_P_Aeromonadales_61_5_9, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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15295..16467
DNA (1173bp) protein (391aa)
twitching motility protein PilT n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4BCF
pilus retraction protein PilT
Pilus retraction protein PilT {ECO:0000313|EMBL:AGA29401.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1944_16
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

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16486..17142
DNA (657bp) protein (219aa)
2-heptaprenyl-1,4-naphthoquinone methyltransferase n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZTK0_9PLAN
2-heptaprenyl-1,4-naphthoquinone methyltransferase {ECO:0000313|EMBL:EAQ80263.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
methyltransferase type 11
SCN18_30_10_14_R2_B_scaffold_1944_17
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(17236..18606)
DNA (1371bp) protein (457aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4BCD
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:EEF60729.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
WD40 repeat-like protein
Displaying 17 items

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