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SCN18_30_10_14_R2_B_scaffold_1953

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_1953_1
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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177..683
DNA (507bp) protein (169aa)
acetolactate synthase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C500C
acetolactate synthase small subunit
Acetolactate synthase, small subunit {ECO:0000313|EMBL:ADB19330.1}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
SCN18_30_10_14_R2_B_scaffold_1953_2
unknown

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680..988
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C500D
SCN18_30_10_14_R2_B_scaffold_1953_3
RBG_13_Planctomycetes_63_9_curated, Planctomycetia, Planctomycetes, Bacteria

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comp(1165..2244)
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C48C3
hypothetical protein
Tax=RBG_13_Planctomycetes_63_9_curated
SCN18_30_10_14_R2_B_scaffold_1953_4
unknown

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comp(2501..2986)
DNA (486bp) protein (162aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1953_5
Rubinisphaera brasiliensis, Rubinisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(3072..3752)
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C57B1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY61965.1}; Flags: Precursor;; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
SCN18_30_10_14_R2_B_scaffold_1953_6
Rhodopirellula baltica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(4195..4464)
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4EA1
Uncharacterized protein {ECO:0000313|EMBL:EGF24938.1}; TaxID=991778 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica WH47.;"
SCN18_30_10_14_R2_B_scaffold_1953_7
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

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comp(4680..5879)
DNA (1200bp) protein (400aa)
VWA containing CoxE family protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R311_ISOPI
VWA containing CoxE family protein
VWA containing CoxE family protein {ECO:0000313|EMBL:ADV61515.1}; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
SCN18_30_10_14_R2_B_scaffold_1953_8
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

Not on your lists

comp(5925..8267)
DNA (2343bp) protein (781aa)
Uncharacterized protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R312_ISOPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV61516.1}; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
SCN18_30_10_14_R2_B_scaffold_1953_9
SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_363, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8264..9409)
DNA (1146bp) protein (382aa)
ATPase associated with various cellular activities AAA_5 n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R313_ISOPI
ATPase
ATPase associated with various cellular activities AAA_5 {ECO:0000313|EMBL:ADV61517.1}; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
SCN18_30_10_14_R2_B_scaffold_1953_10
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(9483..11366)
DNA (1884bp) protein (628aa)
Uncharacterized protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R314_ISOPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV61518.1}; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
SCN18_30_10_14_R2_B_scaffold_1953_11
SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16, SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16, SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16, SCNPILOT_CONT_1000_P_Sphingobacteriales_46_16, Bacteroidetes, Bacteria

Not on your lists

comp(11411..11743)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Thermosynechococcus sp. NK55 RepID=V5V7I4_9CHRO
protein of unknown function TIGR02436
Uncharacterized protein {ECO:0000313|EMBL:AHB89504.1}; TaxID=1394889 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Thermosynechococcus.;" source="Thermosynechococcus sp. NK55a.;"
SCN18_30_10_14_R2_B_scaffold_1953_12
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

Not on your lists

comp(11874..13340)
DNA (1467bp) protein (489aa)
Zinc finger SWIM domain protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R315_ISOPI
zinc finger SWIM domain-containing protein
Zinc finger SWIM domain protein {ECO:0000313|EMBL:ADV61519.1}; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
SCN18_30_10_14_R2_B_scaffold_1953_13
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

13590..15473
DNA (1884bp) protein (628aa)
RNA polymerase, sigma-24 subunit, ECF subfamily protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5720
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49278.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
sigma-70 family RNA polymerase sigma factor
Displaying 13 items

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