ggKbase home page

SCN18_30_10_14_R2_B_scaffold_6024

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_6024_1
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(2..2410)
DNA (2409bp) protein (803aa)
sodium/hydrogen exchanger family protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4079
sodium/hydrogen exchanger
Tax=RBG_16_Acidobacteria_70_10_curated
SCN18_30_10_14_R2_B_scaffold_6024_2
SCNPILOT_CONT_500_BF_Plasmid_72_74, SCNPILOT_CONT_500_BF_Plasmid_72_74, SCNPILOT_CONT_500_BF_Plasmid_72_74, SCNPILOT_CONT_500_BF_Plasmid_72_74, SCNPILOT_CONT_500_BF_Plasmid_72_74, Plasmid-like

Not on your lists

comp(2750..3649)
DNA (900bp) protein (300aa)
WD-repeat protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3855
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49280.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
serine/threonine protein kinase with WD40 repeats
SCN18_30_10_14_R2_B_scaffold_6024_3
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3720..4526)
DNA (807bp) protein (269aa)
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3D48
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000313|EMBL:AKF10770.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
SCN18_30_10_14_R2_B_scaffold_6024_4
SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, Verrucomicrobia

Not on your lists

comp(4561..5247)
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C534A
pyridoxal phosphate protein
Pyridoxal phosphate enzyme, YggS family {ECO:0000313|EMBL:AGA29804.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_6024_5
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5299..5649)
DNA (351bp) protein (117aa)
zinc-binding protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5349
Protein kinase C inhibitor {ECO:0000313|EMBL:EAQ80207.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
histidine triad (HIT) protein
SCN18_30_10_14_R2_B_scaffold_6024_6
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

5721..6674
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5348
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB15615.1}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
SCN18_30_10_14_R2_B_scaffold_6024_7
SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, Verrucomicrobia

Not on your lists

6883..7653
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E49236
biotin apo-protein ligase-like protein
Biotin apo-protein ligase-related protein {ECO:0000313|EMBL:ADY60704.1}; Flags: Precursor;; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
SCN18_30_10_14_R2_B_scaffold_6024_8
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

7801..11232
DNA (3432bp) protein (1144aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4E23
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49278.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
sigma-70 family RNA polymerase sigma factor
Displaying 8 items

View Taxonomy