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SCN18_30_10_14_R2_B_scaffold_6460

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_6460_1
scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, Eukaryote

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153..1361
DNA (1209bp) protein (403aa)
3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3D5A
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
SCN18_30_10_14_R2_B_scaffold_6460_2
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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1358..2023
DNA (666bp) protein (222aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1429043 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae; Desulfarculus.;" source="Desulfarculus sp. SPR.;"
endonuclease III (EC:4.2.99.18)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002F04646
SCN18_30_10_14_R2_B_scaffold_6460_3
Dyadobacter fermentans_SCNpilot_P_inoc_Dyadobacter_48_40, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(2155..2766)
DNA (612bp) protein (204aa)
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; TaxID=120965 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; environmental samples.;" source="uncultured planctomycete.;"
NADH-quinone oxidoreductase subunit beta (EC:1.6.99.5)
NADH dehydrogenase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4A5E
SCN18_30_10_14_R2_B_scaffold_6460_4
Mucilaginibacter paludis_SCNPILOT_CONT_1000_P_Mucilaginibacter_44_25, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2825..3364)
DNA (540bp) protein (180aa)
NADH-quinone oxidoreductase subunit {ECO:0000256|RuleBase:RU003639}; EC=1.6.5.11 {ECO:0000256|RuleBase:RU003639};; TaxID=120965 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; environmental samples.;" source="uncultured planctomycete.;"
NADH dehydrogenase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C51FB
NADH-ubiquinone/plastoquinone oxidoreductase chain 3
SCN18_30_10_14_R2_B_scaffold_6460_5
CN-SCN_Cytophagaceae_12x, CN-SCN_Cytophagaceae_12x, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(3562..4101)
DNA (540bp) protein (180aa)
NADH dehydrogenase subunit I n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C51FC
4Fe-4S ferredoxin
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:ADG67167.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
SCN18_30_10_14_R2_B_scaffold_6460_6
CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, Acidobacteria

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4212..5057
DNA (846bp) protein (282aa)
expressed protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4A3B
hypothetical protein
Tetratricopeptide domain protein {ECO:0000313|EMBL:ADB18608.1}; Flags: Precursor;; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
SCN18_30_10_14_R2_B_scaffold_6460_7
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(5544..5810)
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C536D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG67166.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
SCN18_30_10_14_R2_B_scaffold_6460_8
CN-SCN_Cytophagaceae_12x, CN-SCN_Cytophagaceae_12x, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(6946..8787)
DNA (1842bp) protein (614aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|SAAS:SAAS00029496};; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
glucosamine-6-phosphate deaminase-like protein (EC:3.5.99.6)
glucosamine-6-phosphate deaminase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4E92
Displaying 8 items

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