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SCN18_30_10_14_R2_B_scaffold_3346

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_3346_1
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(182..1534)
DNA (1353bp) protein (451aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4042
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV62290.1}; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
SCN18_30_10_14_R2_B_scaffold_3346_2
SCNpilot_BF_INOC_Bacteroidetes_43_41, SCNpilot_BF_INOC_Bacteroidetes_43_41, SCNpilot_BF_INOC_Bacteroidetes_43_41, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1741..2250
DNA (510bp) protein (170aa)
Cytochrome c nitrate reductase, small subunit n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B2A0C4_OPITP
cytochrome c nitrate reductase, small subunit
Cytochrome c nitrate reductase, small subunit {ECO:0000313|EMBL:ACB77878.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
SCN18_30_10_14_R2_B_scaffold_3346_3
SCNpilot_P_inoc_Paludibacter_47_17, SCNpilot_P_inoc_Paludibacter_47_17, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2276..3772
DNA (1497bp) protein (499aa)
Cytochrome c-552 {ECO:0000256|SAAS:SAAS00233541}; EC=1.-.-.- {ECO:0000256|SAAS:SAAS00275652};; EC=1.7.2.2 {ECO:0000256|SAAS:SAAS00233490};; Flags: Precursor;; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) (Thermus; silvanus).;"
Nitrite reductase (Cytochrome; ammonia-forming) n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BH02_MEISD
nitrite reductase
SCN18_30_10_14_R2_B_scaffold_3346_4
scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, Eukaryote

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comp(3651..4667)
DNA (1017bp) protein (339aa)
SCN18_30_10_14_R2_B_scaffold_3346_5
Rhodopirellula europaea, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

5090..5944
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3FAB
Uncharacterized protein {ECO:0000313|EMBL:EMB18204.1}; TaxID=1263867 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula europaea 6C.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_3346_6
CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, Acidobacteria

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6055..7344
DNA (1290bp) protein (430aa)
6-phosphofructokinase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C37FF
6-phosphofructokinase
Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
SCN18_30_10_14_R2_B_scaffold_3346_7
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

7593..8006
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4987
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADK82189.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
SCN18_30_10_14_R2_B_scaffold_3346_8
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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8063..9361
DNA (1299bp) protein (433aa)
glutamate dehydrogenase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4699
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Glu/Leu/Phe/Val dehydrogenase
SCN18_30_10_14_R2_B_scaffold_3346_9
SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, Bacteria

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comp(9409..10617)
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5930
Uncharacterized protein {ECO:0000313|EMBL:AKF11787.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_3346_10
SCN_Comamonadaceae_20x, SCN_Comamonadaceae_20x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10781..12238
DNA (1458bp) protein (486aa)
MDO-like protein n=1 Tax=Mycobacterium xenopi RIVM700367 RepID=I0RM02_MYCXE
MDO-like protein {ECO:0000313|EMBL:EID12155.1}; TaxID=1150591 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium xenopi RIVM700367.;"
glucans biosynthesis protein mdoC-transmembrane protein
SCN18_30_10_14_R2_B_scaffold_3346_11
unknown

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12324..12512
DNA (189bp) protein (63aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_3346_12
CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, Acidobacteria

Not on your lists

comp(12598..13566)
DNA (969bp) protein (323aa)
translation factor SUA5 n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C524F
translation factor SUA5
Translation factor SUA5 {ECO:0000313|EMBL:ABJ82575.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SCN18_30_10_14_R2_B_scaffold_3346_13
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

13669..15126
DNA (1458bp) protein (486aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5250
hypothetical protein
Tax=RBG_16_Planctomycetes_64_12_curated
SCN18_30_10_14_R2_B_scaffold_3346_14
unknown

Not on your lists

15138..15479
DNA (342bp) protein (114aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_3346_15
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

Not on your lists

15638..16258
DNA (621bp) protein (207aa)
FHA domain containing protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C56D6
Forkhead-associated protein {ECO:0000313|EMBL:EFO80951.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
FHA domain-containing protein
SCN18_30_10_14_R2_B_scaffold_3346_16
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

16330..17421
DNA (1092bp) protein (364aa)
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:EMI18103.1}; EC=3.1.-.- {ECO:0000313|EMBL:EMI18103.1};; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;"
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI000313C0EF
signal peptide-domain containing protein
SCN18_30_10_14_R2_B_scaffold_3346_17
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(17458..19245)
DNA (1788bp) protein (596aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C47E6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27459.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_3346_18
Dyadobacter fermentans_SCNpilot_P_inoc_Dyadobacter_48_40, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


comp(19393..20940)
DNA (1548bp) protein (516aa)
prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571, ECO:0000313|EMBL:CCH02086.1};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
prolyl-tRNA synthetase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5103
SCN18_30_10_14_R2_B_scaffold_3346_19
Pseudanabaena sp. PCC 7367, Pseudanabaena, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

21079..21948
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C47BA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY69592.1}; TaxID=82654 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Pseudanabaena.;" source="Pseudanabaena sp. PCC 7367.;"
SCN18_30_10_14_R2_B_scaffold_3346_20
unknown

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21945..22337
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C47BB
SCN18_30_10_14_R2_B_scaffold_3346_21
unknown

Not on your lists

22407..23057
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3FAA
SCN18_30_10_14_R2_B_scaffold_3346_22
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23153..24232
DNA (1080bp) protein (360aa)
Ribose transporter, periplasmic binding protein, partial n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C365A
monosaccharide ABC transporter substrate-binding protein
Monosaccharide ABC transporter substrate-binding protein, CUT2 family {ECO:0000313|EMBL:ADV63866.1}; Flags: Precursor;; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
SCN18_30_10_14_R2_B_scaffold_3346_23
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24289..25803
DNA (1515bp) protein (505aa)
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
D-ribose transporter ATP binding protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C367A
rbsA1; ribose ABC transporter ATP-binding protein
SCN18_30_10_14_R2_B_scaffold_3346_24
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25800..26810
DNA (1011bp) protein (337aa)
inner-membrane translocator (EC:3.6.3.17)
Inner-membrane translocator {ECO:0000313|EMBL:ADG66625.1}; EC=3.6.3.17 {ECO:0000313|EMBL:ADG66625.1};; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
Putative Sugar (D-ribose) ABC transporter (permease protein) n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C367B
SCN18_30_10_14_R2_B_scaffold_3346_25
unknown

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comp(26863..27015)
DNA (153bp) protein (51aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4BD1
SCN18_30_10_14_R2_B_scaffold_3346_26
SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27185..27871)
DNA (687bp) protein (229aa)
iron dependent repressor, putative n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4E08
DtxR family iron (metal) dependent repressor
Tax=RBG_16_RIF_WS3X_71_46_curated
SCN18_30_10_14_R2_B_scaffold_3346_27
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27926..29113)
DNA (1188bp) protein (396aa)
lipid-A-disaccharide synthetase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4E09
lipid-A-disaccharide synthase
Lipid-A-disaccharide synthase {ECO:0000313|EMBL:AGA29444.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Displaying 27 items

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