ggKbase home page

SCN18_30_10_14_R2_B_scaffold_3357

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_3357_1
SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, Verrucomicrobia

Not on your lists

3..2081
DNA (2079bp) protein (693aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
two component sensor histidine kinase, partial n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C40D0
histidine kinase
SCN18_30_10_14_R2_B_scaffold_3357_2
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2139..3227)
DNA (1089bp) protein (363aa)
Universal stress protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SFN9_THIDA
universal stress protein
Tax=BJP_IG2069_Syntrophobacterales_47_18
SCN18_30_10_14_R2_B_scaffold_3357_3
unknown

Not on your lists

comp(3427..3882)
DNA (456bp) protein (152aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_3357_4
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3964..5079)
DNA (1116bp) protein (372aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C491A
prepilin-type N-terminal cleavage/methylation domain-containing protein
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:AGA27991.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_3357_5
unknown

Not on your lists

comp(5118..5246)
DNA (129bp) protein (43aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_3357_6
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

5576..6073
DNA (498bp) protein (166aa)
probable hydroxymyristoyl-(acyl carrier protein) dehydratase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C56F0
Marine sediment metagenome DNA, contig: S06H3_S02804 {ECO:0000313|EMBL:GAI22068.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
(3R)-hydroxymyristoyl-ACP dehydratase
SCN18_30_10_14_R2_B_scaffold_3357_7
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

6070..6834
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E25CAA
3-oxoacyl-(Acyl-carrier protein) reductase {ECO:0000313|EMBL:EDL61392.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
3-oxoacyl-(acyl-carrier-protein) reductase
SCN18_30_10_14_R2_B_scaffold_3357_8
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

6887..7276
DNA (390bp) protein (130aa)
acyl carrier protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C56EE
Probable acyl carrier protein {ECO:0000313|EMBL:EDL61391.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
phosphopantetheine-binding protein
SCN18_30_10_14_R2_B_scaffold_3357_9
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

7360..7851
DNA (492bp) protein (164aa)
hydroxymyristoyl-ACP dehydratase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C56ED
beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ
Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabA/FabZ {ECO:0000313|EMBL:ADG68936.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
SCN18_30_10_14_R2_B_scaffold_3357_10
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

8084..9364
DNA (1281bp) protein (427aa)
3-oxoacyl-(acyl-carrier protein) synthase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C56EC
3-oxoacyl-ACP synthase
3-oxoacyl-(Acyl-carrier-protein) synthase {ECO:0000313|EMBL:AGA30310.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_3357_11
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

9368..9835
DNA (468bp) protein (156aa)
3-oxoacyl-(acyl-carrier-protein) synthase II (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; Flags: Precursor;; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
3-oxoacyl-ACP synthase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C56EB
Displaying 11 items

View Taxonomy