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SCN18_30_10_14_R2_B_scaffold_3370

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_3370_1
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..105)
DNA (105bp) protein (35aa)
SCN18_30_10_14_R2_B_scaffold_3370_2
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(170..460)
DNA (291bp) protein (97aa)
Putative adenylate cyclase family n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BTQ6_GRABC
Putative adenylate cyclase family protein
Putative adenylate cyclase family protein {ECO:0000313|EMBL:AHJ62725.1}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
SCN18_30_10_14_R2_B_scaffold_3370_3
SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, Verrucomicrobia

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495..1370
DNA (876bp) protein (292aa)
metallophosphoesterase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5121
Metallophosphoesterase {ECO:0000313|EMBL:KJS18083.1}; TaxID=1629717 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c4b.;"
metallophosphoesterase
SCN18_30_10_14_R2_B_scaffold_3370_4
SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1375..1989)
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5124
Tax=RBG_13_Planctomycetes_63_9_curated
SCN18_30_10_14_R2_B_scaffold_3370_5
SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_42_11, SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_42_11, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1989..5414)
DNA (3426bp) protein (1142aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C46CA
Uncharacterized protein {ECO:0000313|EMBL:EDL56501.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
heme-binding protein
SCN18_30_10_14_R2_B_scaffold_3370_6
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

Not on your lists

comp(5603..8263)
DNA (2661bp) protein (887aa)
Glycosyl hydrolase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SPP3_9BACT
Glycosyl hydrolase {ECO:0000313|EMBL:BAL58129.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
BNR repeat-containing glycosyl hydrolase
SCN18_30_10_14_R2_B_scaffold_3370_7
unknown

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comp(8838..9647)
DNA (810bp) protein (270aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_3370_8
unknown

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comp(9648..9785)
DNA (138bp) protein (46aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_3370_9
SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, Actinobacteria, Actinobacteria, Bacteria

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9824..11356
DNA (1533bp) protein (511aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3A59
Hemolysin-type calcium-binding region domain protein {ECO:0000313|EMBL:EMI19470.1}; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_3370_10
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(11405..12628)
DNA (1224bp) protein (408aa)
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02007}; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
tyrosyl-tRNA synthetase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4BC7
SCN18_30_10_14_R2_B_scaffold_3370_11
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12740..13207)
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4BC8
hypothetical protein
UPF0102 protein Sinac_3316 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_3370_12
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists


comp(13264..13779)
DNA (516bp) protein (172aa)
50S ribosomal protein L19 n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4BC9
50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
SCN18_30_10_14_R2_B_scaffold_3370_13
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(13833..14501)
DNA (669bp) protein (223aa)
tRNA (guanine-N1)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
tRNA (guanine-N1)-methyltransferase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4BCA
SCN18_30_10_14_R2_B_scaffold_3370_14
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists


comp(14506..14832)
DNA (327bp) protein (109aa)
probable 30S ribosomal protein S16 n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4BCB
rpsP; 30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000255|HAMAP-Rule:MF_00385}; TaxID=243090 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica (strain SH1).;"
SCN18_30_10_14_R2_B_scaffold_3370_15
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

Not on your lists

15001..16671
DNA (1671bp) protein (557aa)
Amidohydrolase 3 n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C54F3
Predicted TIM-barrel fold metal-dependent hydrolase {ECO:0000313|EMBL:CDM64314.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Amidohydrolase 3
SCN18_30_10_14_R2_B_scaffold_3370_16
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(16791..18239)
DNA (1449bp) protein (483aa)
signal recognition particle n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4BCC
signal recognition particle subunit FFH/SRP54 (srp54)
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
SCN18_30_10_14_R2_B_scaffold_3370_17
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

18420..18554
DNA (135bp) protein (45aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4BCD
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:EEF60729.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
pyrrolo-quinoline quinone repeat-containing protein
Displaying 17 items

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