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SCN18_30_10_14_R2_B_scaffold_3485

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_3485_1
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(3..1166)
DNA (1164bp) protein (388aa)
Peptidase U32 n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4EBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP35308.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
SCN18_30_10_14_R2_B_scaffold_3485_2
SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, Gemmatimonadetes, Bacteria

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comp(1276..4272)
DNA (2997bp) protein (999aa)
Protein kinase:GAF n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4667
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ADV62021.1}; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
SCN18_30_10_14_R2_B_scaffold_3485_3
SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, Actinobacteria, Actinobacteria, Bacteria

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comp(4398..4820)
DNA (423bp) protein (141aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX03930.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
SCN18_30_10_14_R2_B_scaffold_3485_4
unknown

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comp(4827..5411)
DNA (585bp) protein (195aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_3485_5
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

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comp(5502..6863)
DNA (1362bp) protein (454aa)
WD40 repeat-containing protein n=1 Tax=Frankia sp. CN3 RepID=G6HDI6_9ACTO
Transcriptional regulator, XRE family {ECO:0000313|EMBL:CDR18162.1}; TaxID=576784 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces iranensis.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_3485_6
unknown

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7067..7579
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C54C9
SCN18_30_10_14_R2_B_scaffold_3485_7
scnpilot_dereplicated_Eukaryote_Rotifera_1, scnpilot_dereplicated_Eukaryote_Rotifera_1, scnpilot_dereplicated_Eukaryote_Rotifera_1, scnpilot_dereplicated_Eukaryote_Rotifera_1, scnpilot_dereplicated_Eukaryote_Rotifera_1, Eukaryote

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7646..9784
DNA (2139bp) protein (713aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C596D
Transglutaminase-like domain protein {ECO:0000313|EMBL:EMI46640.1}; TaxID=595460 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sp. SWK7.;"
polyhydroxyalkanoate depolymerase
SCN18_30_10_14_R2_B_scaffold_3485_8
unknown

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comp(9726..11234)
DNA (1509bp) protein (503aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C38DA
SCN18_30_10_14_R2_B_scaffold_3485_9
Sphingopyxis sp. MC1_SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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11429..13408
DNA (1980bp) protein (660aa)
Protein kinase:GAF n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4667
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ADV62020.1}; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
SCN18_30_10_14_R2_B_scaffold_3485_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(13413..13913)
DNA (501bp) protein (167aa)
SMP-30/Gluconolaconase/LRE domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CV43_9BACT
SMP-30/Gluconolaconase/LRE domain protein {ECO:0000313|EMBL:EDY22431.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCN18_30_10_14_R2_B_scaffold_3485_11
Rhodanobacter spathiphylli_SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_34, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13980..14744)
DNA (765bp) protein (255aa)
transcriptional regulator, MerR family protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C594F
MerR family transcriptional regulator
MerR family transcriptional regulatory protein {ECO:0000313|EMBL:BAC91598.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
Displaying 11 items

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