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SCN18_30_10_14_R2_B_scaffold_3707

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_3707_1
unknown

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comp(2..64)
DNA (63bp) protein (21aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_3707_2
SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, Verrucomicrobia

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285..1994
DNA (1710bp) protein (570aa)
Putative glycosyl hydrolase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3D4_9BACT
Putative glycosyl hydrolase {ECO:0000313|EMBL:EDY19245.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SCN18_30_10_14_R2_B_scaffold_3707_3
SCNpilot_P_inoc_Xanthomonadales_63_13, SCNpilot_P_inoc_Xanthomonadales_63_13, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2000..2458)
DNA (459bp) protein (153aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Alkylhydroperoxidase like protein, AhpD family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XN82_9BACT
alkylhydroperoxidase-like protein
SCN18_30_10_14_R2_B_scaffold_3707_4
SCNPILOT_EXPT_500_P_Chlamydiae_37_5_partial, SCNPILOT_EXPT_500_P_Chlamydiae_37_5_partial, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(2663..3412)
DNA (750bp) protein (250aa)
short-chain dehydrogenase/reductase SDR (EC:1.1.1.100)
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACC84806.1}; EC=1.1.1.100 {ECO:0000313|EMBL:ACC84806.1};; TaxID=63737 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc punctiforme (strain ATCC 29133 / PCC 73102).;"
Short-chain dehydrogenase/reductase SDR n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2IZG4_NOSP7
SCN18_30_10_14_R2_B_scaffold_3707_5
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

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comp(3551..4303)
DNA (753bp) protein (251aa)
short-chain dehydrogenase n=1 Tax=Zavarzinella formosa RepID=UPI0002DBC55F
dehydrogenase
Uncharacterized protein {ECO:0000313|EMBL:AGA26236.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_3707_6
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4376..4876)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002F501AC
Uncharacterized protein {ECO:0000313|EMBL:EPX56516.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_3707_7
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4999..5445
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3D98
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:ERJ38104.1}; TaxID=1335308 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia sp. AU4i.;"
HxlR family transcriptional regulator
SCN18_30_10_14_R2_B_scaffold_3707_8
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5542..6783)
DNA (1242bp) protein (414aa)
MFS transporter n=1 Tax=Zavarzinella formosa RepID=UPI00037F5176
major facilitator superfamily permease
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
SCN18_30_10_14_R2_B_scaffold_3707_9
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(6882..7373)
DNA (492bp) protein (164aa)
Putative acetyltransferase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F8U8_SORC5
acetyltransferase
Putative acetyltransferase {ECO:0000313|EMBL:CAN94693.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_30_10_14_R2_B_scaffold_3707_10
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7387..8379)
DNA (993bp) protein (331aa)
alkane 1-monooxygenase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C579B
luciferase family oxidoreductase
Luciferase family oxidoreductase, group 1 {ECO:0000313|EMBL:AGA25646.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_3707_11
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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8452..8790
DNA (339bp) protein (113aa)
cupin n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4EA5
Uncharacterized protein {ECO:0000313|EMBL:EPX94573.1}; TaxID=1235457 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. AU12-08.;"
cupin
Displaying 11 items

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