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SCN18_30_10_14_R2_B_scaffold_3866

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_3866_1
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

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comp(377..1360)
DNA (984bp) protein (328aa)
magnesium chelatase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4E35
ATPase
Tax=RBG_16_Planctomycetes_64_12_curated
SCN18_30_10_14_R2_B_scaffold_3866_2
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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1572..2951
DNA (1380bp) protein (460aa)
secretion protein HlyD n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4E36
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ADB15898.1}; Flags: Precursor;; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
SCN18_30_10_14_R2_B_scaffold_3866_3
CN-SCN_Erythrobacter_14x, CN-SCN_Erythrobacter_14x, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3013..3996
DNA (984bp) protein (328aa)
CBS domain containing protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4E37
hypothetical protein
Tax=CG_Delta_01
SCN18_30_10_14_R2_B_scaffold_3866_4
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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4147..5118
DNA (972bp) protein (324aa)
probable polysaccharide export protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3D1D
Wza {ECO:0000313|EMBL:EAQ81573.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
Soluble ligand-binding domain-containing protein
SCN18_30_10_14_R2_B_scaffold_3866_5
unknown

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5137..5631
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3AA4
SCN18_30_10_14_R2_B_scaffold_3866_6
SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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5685..6338
DNA (654bp) protein (218aa)
SCN18_30_10_14_R2_B_scaffold_3866_7
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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6365..7327
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3AA3
hypothetical protein
Vegetative cell wall protein gp1; Hydroxyproline-rich glycoprotein 1; Flags: Precursor;; TaxID=3055 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas.;" source="Chlamydomonas reinhardtii (Chlamydomonas smithii).;"
SCN18_30_10_14_R2_B_scaffold_3866_8
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7302..8378)
DNA (1077bp) protein (359aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
pseudouridine synthase, RluA family protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4D9D
RluA family pseudouridine synthase
SCN18_30_10_14_R2_B_scaffold_3866_9
unknown

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comp(8382..9122)
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E991B8
SCN18_30_10_14_R2_B_scaffold_3866_10
SCNpilot_BF_INOC_Clostridium_37_18, SCNpilot_BF_INOC_Clostridium_37_18, Clostridiales, Clostridia, Firmicutes, Bacteria

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9227..9631
DNA (405bp) protein (135aa)
Putative uncharacterized protein id=3103254 bin=GWC2_Planctomycetes_45_44 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
hypothetical protein
Tax=BJP_IG2158_Planctomycetes_45_10
SCN18_30_10_14_R2_B_scaffold_3866_11
uncultured planctomycete, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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9736..10515
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4D9C
Putative uncharacterized protein {ECO:0000313|EMBL:BAL54991.1}; TaxID=120965 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; environmental samples.;" source="uncultured planctomycete.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_3866_12
unknown

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comp(10808..11161)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI000364A362
SCN18_30_10_14_R2_B_scaffold_3866_13
unknown

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comp(11894..12145)
DNA (252bp) protein (84aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_3866_14
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(12194..13147)
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3A6F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB18512.1}; Flags: Precursor;; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
SCN18_30_10_14_R2_B_scaffold_3866_15
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13222..14823)
DNA (1602bp) protein (534aa)
RNA-directed DNA polymerase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3A6D
reverse transcriptase
Reverse transcriptase (RNA-dependent DNA polymerase) {ECO:0000313|EMBL:AGA28587.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Displaying 15 items

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