ggKbase home page

SCN18_30_10_14_R2_B_scaffold_5411

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_5411_1
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..321)
DNA (321bp) protein (107aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=765912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thioflavicoccus.;" source="Thioflavicoccus mobilis 8321.;"
Polyphosphate kinase, partial n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5579
polyphosphate kinase 1
SCN18_30_10_14_R2_B_scaffold_5411_2
unknown

Not on your lists

comp(390..746)
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4C72
SCN18_30_10_14_R2_B_scaffold_5411_3
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(831..1997)
DNA (1167bp) protein (389aa)
coproporphyrinogen III oxidase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C35F4
oxygen-independent coproporphyrinogen III oxidase
Putative oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:AGA30921.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_5411_4
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(2060..3037)
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5414
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA27080.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_5411_5
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3517..4593)
DNA (1077bp) protein (359aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C42DC
Uncharacterized protein {ECO:0000313|EMBL:KJS40017.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_5411_6
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(4712..6202)
DNA (1491bp) protein (497aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
inosine 5''''-monophosphate dehydrogenase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C42DD
inosine-5''-monophosphate dehydrogenase
SCN18_30_10_14_R2_B_scaffold_5411_7
CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, Eukaryote

Not on your lists

6439..7572
DNA (1134bp) protein (378aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4BE4
SCN18_30_10_14_R2_B_scaffold_5411_8
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7785..8195)
DNA (411bp) protein (137aa)
glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C47E5
dioxygenase of extradiol dioxygenase family
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
SCN18_30_10_14_R2_B_scaffold_5411_9
unknown

Not on your lists

8374..8808
DNA (435bp) protein (145aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_5411_10
unknown

Not on your lists

comp(8850..9101)
DNA (252bp) protein (84aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_5411_11
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9124..9771)
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4BBC
Putative bacteriophage-related transmembrane protein {ECO:0000313|EMBL:ADO97356.1}; TaxID=444860 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Synechococcus phage S-SM2.;"
Displaying 11 items

View Taxonomy