ggKbase home page

SCN18_30_10_14_R2_B_scaffold_1450_6

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: 11208..11822

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C377D similarity UNIREF
DB: UNIREF100
  • Identity: 71.8
  • Coverage: 188.0
  • Bit_score: 278
  • Evalue 4.90e-72
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 47.3
  • Coverage: 203.0
  • Bit_score: 178
  • Evalue 1.20e-42
Tax=RBG_13_Planctomycetes_63_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 53.1
  • Coverage: 179.0
  • Bit_score: 181
  • Evalue 6.70e-43

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9 → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 615
GTGAACGACGACGATCGCCGGCTGATCGCGGAGTGTTTGGGCGGGCGGCGGGATGCCTTCGGCGAGTTGGTATCCCGATACCAGGCCAGACTTTACAGCGCCGCGGTCCGGTTGGTAGACAGTCCCGACGACGCCGCCGATGTCGTCCAGGATGCGTTCCTGAACGCCTACCAGTCGCTCCACGCCTTCAAGGGCGACGCCGAGTTCTTCACCTGGCTGTACCGGATCGCCTTCAACGGCGCCATCAGCCTGAAGCGGAAGAAGCGGCCGACCGGGAGCCTGGACGCGGCAGGCGGGGAGCACGGGTTCGAGCCCGCCGACCCGTCCGATTACGTTCGCACCGGTCACGCCTTGGAGCGGACCGAGGAGGACCGCCTCCTCCACGCGGCGCTCGGGCGGCTCTCGCCGGAGCACCGCGAGGTACTGACGATGAAAGATCTCGACGGCCTCCGTTACGAGGAGATCGCCGAGGTGCTCGGGGTGCCGGTCGGGACCGTGCGGAGCCGCTTGCACCGCGCCCGACTCGAACTCCGCGAACTGCTGGCGCCGCTCGACGACGCCGAGCCACAAGACCGGGGGAGGGGGGATCGTCCACCCCCCGAACCCACCCCATAG
PROTEIN sequence
Length: 205
VNDDDRRLIAECLGGRRDAFGELVSRYQARLYSAAVRLVDSPDDAADVVQDAFLNAYQSLHAFKGDAEFFTWLYRIAFNGAISLKRKKRPTGSLDAAGGEHGFEPADPSDYVRTGHALERTEEDRLLHAALGRLSPEHREVLTMKDLDGLRYEEIAEVLGVPVGTVRSRLHRARLELRELLAPLDDAEPQDRGRGDRPPPEPTP*