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SCN18_30_10_14_R2_B_scaffold_1450

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_1450_1
unknown

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1..246
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C44D3
SCN18_30_10_14_R2_B_scaffold_1450_2
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(301..723)
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C44D2
peptide chain release factor I
Class I peptide chain release factor {ECO:0000313|EMBL:ADB17643.1}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
SCN18_30_10_14_R2_B_scaffold_1450_3
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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833..2464
DNA (1632bp) protein (544aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C44D1
hypothetical protein
Tax=RBG_13_Planctomycetes_44_8b_curated
SCN18_30_10_14_R2_B_scaffold_1450_4
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2520..3893)
DNA (1374bp) protein (458aa)
Uncharacterized protein involved in propionate catabolism (EC:4.2.1.79)
2-methylcitrate dehydratase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C49EC
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
SCN18_30_10_14_R2_B_scaffold_1450_5
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(4078..11025)
DNA (6948bp) protein (2316aa)
excinuclease ABC subunit A n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C377C
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
excinuclease ABC subunit A
SCN18_30_10_14_R2_B_scaffold_1450_6
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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11208..11822
DNA (615bp) protein (205aa)
RNA polymerase, sigma-24 subunit, ECF subfamily protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C377D
sigma-70 family RNA polymerase sigma factor
Tax=RBG_13_Planctomycetes_63_9_curated
SCN18_30_10_14_R2_B_scaffold_1450_7
CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, Eukaryote

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11871..13145
DNA (1275bp) protein (425aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C377E
SCN18_30_10_14_R2_B_scaffold_1450_8
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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13428..15902
DNA (2475bp) protein (825aa)
protein containing a von Willebrand factor type A domain n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C377F
vault protein, inter-alpha-trypsin domain-containing protein
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
SCN18_30_10_14_R2_B_scaffold_1450_9
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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16640..17497
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00036F26E1
sugar phosphate isomerase/epimerase
Sugar phosphate isomerase/epimerase {ECO:0000313|EMBL:AGA30479.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1450_10
SCNpilot_P_inoc_Paludibacter_47_17, SCNpilot_P_inoc_Paludibacter_47_17, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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17606..18535
DNA (930bp) protein (310aa)
probable ferredoxin--NADP reductase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3781
Probable ferredoxin--NADP reductase {ECO:0000313|EMBL:EDL56267.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
oxidoreductase FAD/NAD(P)-binding domain-containing protein
SCN18_30_10_14_R2_B_scaffold_1450_11
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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18554..19435
DNA (882bp) protein (294aa)
probable protein kinase yloP n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3782
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ADV61774.1}; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
SCN18_30_10_14_R2_B_scaffold_1450_12
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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19479..20468
DNA (990bp) protein (330aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
acetyl-CoA carboxylase subunit alpha n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3783
acetyl-CoA carboxylase, carboxyl transferase subunit alpha
SCN18_30_10_14_R2_B_scaffold_1450_13
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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20586..21920
DNA (1335bp) protein (445aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI000380540D
Putative dehydrogenase {ECO:0000313|EMBL:EDL60120.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
oxidoreductase domain-containing protein
SCN18_30_10_14_R2_B_scaffold_1450_14
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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21947..22513
DNA (567bp) protein (189aa)
Probable RNA 2'-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00299}; EC=2.7.1.- {ECO:0000256|HAMAP-Rule:MF_00299};; TaxID=1609134 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-444.;"
RNA 2''''-phosphotransferase n=1 Tax=Streptomyces purpureus RepID=UPI000377E4CE
RNA 2'-phosphotransferase
SCN18_30_10_14_R2_B_scaffold_1450_15
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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22510..23895
DNA (1386bp) protein (462aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002F1DAAC
4-aminobutyrate aminotransferase {ECO:0000313|EMBL:EDL60121.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
class III aminotransferase
SCN18_30_10_14_R2_B_scaffold_1450_16
Hydrogenophaga sp. PBC_SCNpilot_P_inoc_Hydrogenophaga_70_12, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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23907..24839
DNA (933bp) protein (311aa)
cation ABC transporter, permease protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3A0B
ABC-3 protein
ABC-3 protein {ECO:0000313|EMBL:ADW16432.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3).;"
SCN18_30_10_14_R2_B_scaffold_1450_17
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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24917..25876
DNA (960bp) protein (320aa)
permease n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3A0C
permease
Tax=RBG_16_Planctomycetes_64_12_curated
SCN18_30_10_14_R2_B_scaffold_1450_18
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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25909..26865
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI000311ACFF
Uncharacterized protein {ECO:0000313|EMBL:KFM78500.1}; Flags: Fragment;; TaxID=407821 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Araneae; Araneomorphae; Entelegynae; Eresoidea; Eresidae; Stegodyphus.;" source="Stegodyphus mimosarum.;"
UreE urease accessory domain-containing protein
SCN18_30_10_14_R2_B_scaffold_1450_19
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(26957..29914)
DNA (2958bp) protein (986aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3A0E
membrane-bound dehydrogenase
Putative membrane-bound dehydrogenase {ECO:0000313|EMBL:AGA25328.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1450_20
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(29942..31213)
DNA (1272bp) protein (424aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3A0F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27303.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1450_21
SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, SCNpilot_P_inoc_Kapabacteria_57_18, Kapabacteria

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comp(31384..32337)
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3A10
DMT(drug/metabolite transporter) superfamily permease
DMT(Drug/metabolite transporter) superfamily permease {ECO:0000313|EMBL:AGA26106.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1450_22
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(32334..33362)
DNA (1029bp) protein (343aa)
Serine-threonine protein kinase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3A11
serine/threonine protein kinase-related protein
Serine/threonine protein kinase-related protein {ECO:0000313|EMBL:ADG69853.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
Displaying 22 items

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