ggKbase home page

SCN18_30_10_14_R2_B_scaffold_1893_18

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: 16102..16926

Top 3 Functional Annotations

Value Algorithm Source
Rhomboid family protein n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SF61_PLABD similarity UNIREF
DB: UNIREF100
  • Identity: 44.5
  • Coverage: 245.0
  • Bit_score: 196
  • Evalue 3.30e-47
rhomboid family protein similarity KEGG
DB: KEGG
  • Identity: 44.5
  • Coverage: 245.0
  • Bit_score: 196
  • Evalue 9.40e-48
Rhomboid family protein {ECO:0000313|EMBL:ADY58216.1}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.5
  • Coverage: 245.0
  • Bit_score: 196
  • Evalue 4.60e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9 → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 825
ATGGTCGCCCAGAAGGACCAGCCGCTGTCGCAGGAGGAGATGCTCGACCTGATGCGCGCCGCCCAGCGCACGTCGGTGGTACAGGAGTGGGGGCAACTCGACACGGGGAAGGTGATCGATCAGGGGCAGGTGTGGCGGCTCGTCACGCACACCTTCCTCCACGACCGCTACTCGATCTTCCACATCCTGTTCAACATGCTCGCCCTGTACTGGTTCGGCCGCACGCTGGAGATCATGTACGGGTCGCGCGAGTTCCTGCTGTTCTACCTCGCCGCGGCGCTGTGCGGCGCCGCGGCCTACGTCGGACTCGACCTGTACACCGGCTCGACGGTGCCGGCGGTTGGCGCGTCGGGGGCGGTGCTCGGGGTGATGATGCTGTACACCGTACACTTCCCGCGCGAGGAGATCTTCTACTGCTGGTTCTTCCCGGTGCAGATGCGCTGGCTGATGGCGCTGTACGTCATCTGGGACTTGCACCCGGTCCTGCTCGCGCTGGCCGGCGACCGCATGTACTCGGGCATCGGCCACGCGGCGCACCTGGGCGGGCTGGCGTTCGGGTTCGTGTACGCGTGGTACGAGTGGCGCCTCGAACCGCTCCTCGACCGCGTCCCGCTCGTCGGCGCGCGAACGGCCGCCGACCGGCCGCGCCTGCGGGCACGGCCGTCGCGCCCCGCCTGCCACACGGGCGAGTCGGTGCGCGACGGCGGCGAGGTCGATCGCGTACTGGCGAAGGTGTCGGTGGCCGGCGTGGACAGCCTGACCGACGACGAGCGCGCCGTGCTCCGCGCCGAGAGTGCCCGCCTCAAGACGCGAGCCCGTGGGTGA
PROTEIN sequence
Length: 275
MVAQKDQPLSQEEMLDLMRAAQRTSVVQEWGQLDTGKVIDQGQVWRLVTHTFLHDRYSIFHILFNMLALYWFGRTLEIMYGSREFLLFYLAAALCGAAAYVGLDLYTGSTVPAVGASGAVLGVMMLYTVHFPREEIFYCWFFPVQMRWLMALYVIWDLHPVLLALAGDRMYSGIGHAAHLGGLAFGFVYAWYEWRLEPLLDRVPLVGARTAADRPRLRARPSRPACHTGESVRDGGEVDRVLAKVSVAGVDSLTDDERAVLRAESARLKTRARG*