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SCN18_30_10_14_R2_B_scaffold_2139_9

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(7413..8852)

Top 3 Functional Annotations

Value Algorithm Source
two component, sigma-54 specific, transcriptional regulator, Fis family protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5118 similarity UNIREF
DB: UNIREF100
  • Identity: 72.6
  • Coverage: 481.0
  • Bit_score: 692
  • Evalue 2.60e-196
sigma-54 factor interaction domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 43.4
  • Coverage: 461.0
  • Bit_score: 306
  • Evalue 8.60e-81
Sigma-54 factor interaction domain-containing protein {ECO:0000313|EMBL:ADG65991.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.4
  • Coverage: 461.0
  • Bit_score: 306
  • Evalue 4.30e-80

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Taxonomy

CN-SCN_Lautropia_89x → CN-SCN_Lautropia_89x → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1440
ATGACGCCGACCCGCCGGCTCGTCCTCGCCGCCAGCGACCCGCGCCTCGCCCAGGCCGTCCAGGGCCACCTCGCCCGGGCGCTCCAGATCACCGCCCCGGTCGTCCGGTTCGACGAGGTACCGCACCTGCTCGCCCCGGACACCGACGGCGACATCCTCCTGCTCGCCGCCGACTCCGCCGACGCGGCGGCGATCGAGACGGTGGTGCGCGAGACGAAGGTGCAGCTGTCGCCGGCCGGGCTCGGGGTGGTCGAGGGCGAGGCGCTCGCCGGGCGGCGGCTGTTCGACCACCTCGCCCCGTACCTCGCCGGCCGGTGGGGCTGGCCGCACCACGCCCGCGAGCTCACCGCCTGGGTGCGGCAGGCGCAGACGCCCGGCGGGGTCGAGTTCGCCGACCCGGCGACCGAATCGACCACCGAGGCGATCCGCCGCAAGCTCGTCAACCACACCCCGTCGCTGACGACGATGGTGGACCAGCTGTGCATCGCCGCCGCCCACGACGTGACGGTCCTGATCGAGGGCGAGACCGGGACCGGCAAGACGTTCCTGGCGCGCCTCGTCCACGACTGCTCGCCGCGGAAGCCGAACCGGTTCCTGGTGGTCGCCTGCGGCACACTGTCCGGCAACCTCATCGCCAGTGAGTTCTTCGGCCACGCCCGCGGGTCGTTCACCGGGGCGGACGCGGCGAAGGTCGGCAAGTTCGCCGCCGCCGGCGAGGGCACCCTGCTGCTCGACGAGATCGACACCCTCGGCCTTGACCACCAGGCGAACCTGCTGCGGGTGATCGAGACCGGCGAGTTCGAGCCGGTCGGGAGCAACGACACGCAGACCAGCCGGGCGCGCGTGATCGCGGCGACCAACTGGAACCTGGCCGACGCGGTCGAGCGCGGGACGTTCCGCCGTGACCTGTACTACCGCCTCCAGGTGCTGAGCTTTCACCTCCCGCCGCTCCGCCACCGCCCGGAGGACATCGGGCCGCTGGTGCGGGGCATGGTGGCGCGGTACGGGACGAAGTTCGGCAAGCGGTTGTTCGGCGTGTGCCCGGAGGCGATGCGGGCGCTGGAGGGTTACCCCTGGCCGGGGAACATCCGGCAGCTGGAGAACGTGATCCAGCAGGCGGTGCTGACGAGCAGCGGGAACGAGCTGAAGCTGCACCACCTGTCGCCGCTCGTCCACGCCCGGGCCGACGTGGCCGCCGTCGCCCCCGCCACGCCGCCGATGAACGGGTACGGCGGGACGCTGAAGCAGAGCCGCGAGTCGACGGAGCGGGTGAACATCCTGCGGGCGCTGGAGAAGGCCGGGCAGAGCCGGACGCGGGCGGCACAGCTGCTCGGTGTCAGCCGGGTGACGCTGTACAAGAAGATGAAGAAGTACGGCCTGTTCACCCGCCCCGAGCCGCTCTCCCCGTTCGAGCCGTTCGCCCCGCGGGTGGGCGGTTAG
PROTEIN sequence
Length: 480
MTPTRRLVLAASDPRLAQAVQGHLARALQITAPVVRFDEVPHLLAPDTDGDILLLAADSADAAAIETVVRETKVQLSPAGLGVVEGEALAGRRLFDHLAPYLAGRWGWPHHARELTAWVRQAQTPGGVEFADPATESTTEAIRRKLVNHTPSLTTMVDQLCIAAAHDVTVLIEGETGTGKTFLARLVHDCSPRKPNRFLVVACGTLSGNLIASEFFGHARGSFTGADAAKVGKFAAAGEGTLLLDEIDTLGLDHQANLLRVIETGEFEPVGSNDTQTSRARVIAATNWNLADAVERGTFRRDLYYRLQVLSFHLPPLRHRPEDIGPLVRGMVARYGTKFGKRLFGVCPEAMRALEGYPWPGNIRQLENVIQQAVLTSSGNELKLHHLSPLVHARADVAAVAPATPPMNGYGGTLKQSRESTERVNILRALEKAGQSRTRAAQLLGVSRVTLYKKMKKYGLFTRPEPLSPFEPFAPRVGG*