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SCN18_30_10_14_R2_B_scaffold_2139

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_2139_1
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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1..954
DNA (954bp) protein (318aa)
threonine synthase (EC:4.2.3.1)
threonine synthase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4C0B
Tax=RBG_16_Planctomycetes_64_12_curated
SCN18_30_10_14_R2_B_scaffold_2139_2
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

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994..1236
DNA (243bp) protein (81aa)
Toxin-antitoxin (TA) system antitoxin {ECO:0000313|EMBL:KIF28532.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
SCN18_30_10_14_R2_B_scaffold_2139_3
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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1233..1619
DNA (387bp) protein (129aa)
PilT protein-like protein n=1 Tax=Microcystis aeruginosa PCC 9808 RepID=I4HQB1_MICAE
Toxin-antitoxin system, toxin component, PIN family {ECO:0000313|EMBL:EKE96919.1}; TaxID=1188 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix sp. PCC 7601.;"
PilT protein-like protein
SCN18_30_10_14_R2_B_scaffold_2139_4
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1620..2603)
DNA (984bp) protein (328aa)
gluconolactonase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4FDC
gluconolactonase
Gluconolactonase {ECO:0000313|EMBL:AGA31174.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_2139_5
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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2690..3976
DNA (1287bp) protein (429aa)
transporter n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3B78
nitrate/nitrite transporter
Tax=RBG_13_Deltaproteobacteria_43_22_curated
SCN18_30_10_14_R2_B_scaffold_2139_6
SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, SCNPILOT_EXPT_500_BF_STEP10_Armatimonadetes_55_34, Bacteria

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comp(4064..4813)
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5764
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ADV61069.1}; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
SCN18_30_10_14_R2_B_scaffold_2139_7
unknown

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4909..5442
DNA (534bp) protein (178aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_2139_8
SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, Verrucomicrobia

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comp(5445..7277)
DNA (1833bp) protein (611aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=120965 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; environmental samples.;" source="uncultured planctomycete.;"
glutamine amidotransferase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4DE4
glucosamine/fructose-6-phosphate aminotransferase
SCN18_30_10_14_R2_B_scaffold_2139_9
CN-SCN_Lautropia_89x, CN-SCN_Lautropia_89x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7413..8852)
DNA (1440bp) protein (480aa)
two component, sigma-54 specific, transcriptional regulator, Fis family protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5118
sigma-54 factor interaction domain-containing protein
Sigma-54 factor interaction domain-containing protein {ECO:0000313|EMBL:ADG65991.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
SCN18_30_10_14_R2_B_scaffold_2139_10
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

9095..9862
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3B87
Uncharacterized protein {ECO:0000313|EMBL:ESR40702.1}; TaxID=85681 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Citrus.;" source="Citrus clementina.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2139_11
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

10033..10815
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4E4B
Uncharacterized protein {ECO:0000313|EMBL:EDL60021.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
LmbE family protein
SCN18_30_10_14_R2_B_scaffold_2139_12
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

10943..12361
DNA (1419bp) protein (473aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C587F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27285.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_2139_13
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

12467..15574
DNA (3108bp) protein (1036aa)
serine/threonine-protein kinase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3F57
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ADY59318.1}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
SCN18_30_10_14_R2_B_scaffold_2139_14
unknown

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15661..16338
DNA (678bp) protein (226aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_2139_15
unknown

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16515..16787
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5740
SCN18_30_10_14_R2_B_scaffold_2139_16
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16992..17564
DNA (573bp) protein (191aa)
gluconolactonase precursor n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C511C
Uncharacterized protein {ECO:0000313|EMBL:EDY18469.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
G-D-S-L family lipolytic protein
SCN18_30_10_14_R2_B_scaffold_2139_17
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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17620..18231
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3DAF
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:ADY59969.1}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
SCN18_30_10_14_R2_B_scaffold_2139_18
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(18312..29318)
DNA (11007bp) protein (3669aa)
Regulatory P domain of subtilisin-like proprotein convertases n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DRK6_SINAD
regulatory P domain of subtilisin-like proprotein convertases
Regulatory P domain of subtilisin-like proprotein convertases {ECO:0000313|EMBL:AGA31630.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Displaying 18 items

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