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SCN18_30_10_14_R2_B_scaffold_3873_6

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: 4483..6369

Top 3 Functional Annotations

Value Algorithm Source
putative outer membrane channel for pilus assembly CpaC n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C54FD similarity UNIREF
DB: UNIREF100
  • Identity: 56.6
  • Coverage: 617.0
  • Bit_score: 623
  • Evalue 1.90e-175
type II and III secretion system protein similarity KEGG
DB: KEGG
  • Identity: 31.5
  • Coverage: 559.0
  • Bit_score: 244
  • Evalue 5.30e-62
Type II and III secretion system protein {ECO:0000313|EMBL:ADG66639.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 31.5
  • Coverage: 559.0
  • Bit_score: 244
  • Evalue 2.60e-61

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Taxonomy

SCNpilot_P_inoc_Rhodobacter_64_50 → SCNpilot_P_inoc_Rhodobacter_64_50 → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1887
ATGCACCCGACCGCTACCCCCCGACGGCCGCTCCTGTGGGGGCTCGTACTGACGGCCGGCATCGCCGGACTCGTCCACGCCCAGCCCCCGGGCCTCCCGGCGCTCCCCGCCGCGGCCGTCCAGGACAAGGACAAGGTCGACCCGAAGGCCCAGCCGCCGAAGGACCGCGACACGGGTGTCCCCGAGGTACGGATCGACCCGCGCACGAACGCCCTGATCATCCCGGTCGGCGGGTTCGTCCGGTTCGACGGCAAGCTCCCGGACATCCCGGCCGACATCCTCGTCAGCCGCGAGGACTTCGTCCAGGTCCGGACCGACCCGAACAACCCGAAGGTGCTGCTGCTGACCGGCCGGGCGCCCGGCCTCGCGCAGATCACCCTGCTGTTCAAGGACCGGCCGCGGCAGACCTACGACGTGGTCGTCCAGCCGGACTTCGAGCTGCTCCGGACGATCATCCGCCGGACCGCCCCGACGGCCAACGTCGAGGTCACCCCGGGCCTGGGTAACACGCTCATCCTGAGCGGGTACGTGACGACCCCGCAGGAGGCCGACACGATCAACCGGCTGGCCATCAGCCAGGTCGGCGGCAACCCGCAGAACGTCATCAACATGCTCCAGATCGGGGGCGTCCAGCAGGTCCAGATCGACGTGGTGATCGCGTCGGTGGACCGGAGCGAGATCCGCAGCCGCGGGTTCGACTTCGCCGTCAGCGGCACCAGCGTCACGTTCAGCAGCCTGGTGAGCGGCCTGCTCACCCCGCCGACCGGGTTCGGCAGCGGCACCGTGGCGTTCAGCCCGAACGCCAACCTGCAGCTGGGCGTCGCCCCGGCCGGGTTCTTCAGCGCCCTCCAGGCGCTGCGGACCGAGGGGCTGGCCAAGTTCCTGGCCGAGCCGCGGGTCGTCACCCAGAGCGGCCGCCCGGCCCAGTTCCTGGCCGGCGGCCGGCAGGCCGTCCTCGGGCCGGCGAGCGGGATCAACGGCCCCGGCGTCGTGTTCGAGCAGGTCGGCACCCAGCTGAACGTCGTCCCGATCGTGATGGGCAACGGCAAGGTGTGGCTCGAGGTCCAGCCGAGCATCCGCACGGTGAACCAGGGGCTCGGCATCCAGACCACGTTCGGCACCACCCCCGGGTTCACCGAGAACTCGATCCAGGTGGCCGTCGAGCTGGAGAGCGGCCAGACGTTCGCCATCGGCGGGCTGATCCAGAACAGCGTCCAGGCGTCGGCCAACAAGGTGCCGGTCCTCGGCGACCTGCCGTTCGTCGGCACCGGGTTCAGCAGCGTCCGGTACGAGGAGCGGGAGAGCGAGCTGGTCATCCTGGTGACCCCGCGGCTGGTCCACCCGATGGACTGCAACCAGGTGCCCCGCCGCCTGCCGGGCCGCGAGACCCGCAGCCCCGACGACTACGAGCTCTTCCTGGAGAACATCCTGGAAGCCCCGCGCGGCCAGCGGAAGGTGTGGAACGGCCGGTGCTACAACGCCGCCTGGAAGTGCGACCCGTCGGCCGCCGTGTTCCCGTGTGCCGGGAACGTGTGCTACGGTCCTAACGGAACTCTGTTGCCGGGCGCGGCCTGCGGCGCGGCCGGGTGTGCGGCCCCCGCCCCCGGGCACCACGGCCAGGCGATCCGCCTGACCCCGGCCCCGGCGGTGGCCCCGGCCGCCGCGGCGGCCGCCCCGGTGACGACCCCGGTGACCCCGGCCTCTGCCCCGGTGACCCCGGCGTCCGCCCCGGTGCCCGAGCAGATGCTCGCGCCGGTGACGCCCCCGATGCCGCCCGGCCCGACGGCGTCGGAGCAACCGGCCCTCCTCCCGGCGGTGCCGGGTGCCCCGGTGGACACGACCCCGGCCGAGCCCCCGGTGGTCCCGGTCAGCCCGGCTCGGAACTGA
PROTEIN sequence
Length: 629
MHPTATPRRPLLWGLVLTAGIAGLVHAQPPGLPALPAAAVQDKDKVDPKAQPPKDRDTGVPEVRIDPRTNALIIPVGGFVRFDGKLPDIPADILVSREDFVQVRTDPNNPKVLLLTGRAPGLAQITLLFKDRPRQTYDVVVQPDFELLRTIIRRTAPTANVEVTPGLGNTLILSGYVTTPQEADTINRLAISQVGGNPQNVINMLQIGGVQQVQIDVVIASVDRSEIRSRGFDFAVSGTSVTFSSLVSGLLTPPTGFGSGTVAFSPNANLQLGVAPAGFFSALQALRTEGLAKFLAEPRVVTQSGRPAQFLAGGRQAVLGPASGINGPGVVFEQVGTQLNVVPIVMGNGKVWLEVQPSIRTVNQGLGIQTTFGTTPGFTENSIQVAVELESGQTFAIGGLIQNSVQASANKVPVLGDLPFVGTGFSSVRYEERESELVILVTPRLVHPMDCNQVPRRLPGRETRSPDDYELFLENILEAPRGQRKVWNGRCYNAAWKCDPSAAVFPCAGNVCYGPNGTLLPGAACGAAGCAAPAPGHHGQAIRLTPAPAVAPAAAAAAPVTTPVTPASAPVTPASAPVPEQMLAPVTPPMPPGPTASEQPALLPAVPGAPVDTTPAEPPVVPVSPARN*