ggKbase home page

SCN18_30_10_14_R2_B_scaffold_3873

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_3873_1
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

1..852
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5501
Putative uncharacterized protein {ECO:0000313|EMBL:ADI19497.1}; TaxID=710747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; environmental samples.;" source="uncultured Planctomycetales bacterium HF0500_40D21.;"
homoserine kinase type II (protein kinase fold)
SCN18_30_10_14_R2_B_scaffold_3873_2
Rhodopirellula europaea, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

1122..1313
DNA (192bp) protein (64aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5500
Flp/Fap pilin component {ECO:0000313|EMBL:EMI24459.1}; TaxID=1263868 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula europaea SH398.;"
SCN18_30_10_14_R2_B_scaffold_3873_3
SCNPILOT_CONT_750_P_Burkholderiales_64_62, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1405..1590
DNA (186bp) protein (62aa)
pilus assembly protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3ABE
Flp/Fap pilin component {ECO:0000313|EMBL:EGF27324.1}; TaxID=991778 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica WH47.;"
Flp/Fap pilin component
SCN18_30_10_14_R2_B_scaffold_3873_4
RBG_13_Planctomycetes_63_9_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

1702..2490
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C54FF
peptidase A24A prepilin type IV
Tax=RBG_13_Planctomycetes_63_9_curated
SCN18_30_10_14_R2_B_scaffold_3873_5
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

Not on your lists

2917..4095
DNA (1179bp) protein (393aa)
flp pilus assembly protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C54FE
SCN18_30_10_14_R2_B_scaffold_3873_6
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4483..6369
DNA (1887bp) protein (629aa)
putative outer membrane channel for pilus assembly CpaC n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C54FD
type II and III secretion system protein
Type II and III secretion system protein {ECO:0000313|EMBL:ADG66639.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
SCN18_30_10_14_R2_B_scaffold_3873_7
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

6469..7686
DNA (1218bp) protein (406aa)
probable pilus assembly protein CpaE n=2 Tax=Gemmata obscuriglobus RepID=UPI00016C3601
response regulator receiver protein
Tax=RBG_16_Planctomycetes_64_12_curated
SCN18_30_10_14_R2_B_scaffold_3873_8
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

7800..9182
DNA (1383bp) protein (461aa)
secretion system protein TadA n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3600
type II secretion system protein E
Tax=RBG_16_Planctomycetes_64_10_curated
SCN18_30_10_14_R2_B_scaffold_3873_9
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9424..10392
DNA (969bp) protein (323aa)
secretion system protein TadB n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C35FF
type II secretion system F domain protein
Tax=RBG_16_Planctomycetes_64_10_curated
SCN18_30_10_14_R2_B_scaffold_3873_10
Nitrosospira multiformis_SCNPILOT_SOLID_1_TRIM150_Nitrosospira_54_27, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10531..11490
DNA (960bp) protein (320aa)
secretion protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C35FE
type II secretion system F domain protein
Tax=RBG_16_Planctomycetes_64_12_curated
SCN18_30_10_14_R2_B_scaffold_3873_11
SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_39_21, SCNPILOT_SOLID_1_TRIM150_Sphingobacteriales_39_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11565..12308
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C35FD
SCN18_30_10_14_R2_B_scaffold_3873_12
unknown

Not on your lists

12480..12689
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C35FC
Displaying 12 items

View Taxonomy