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SCN18_30_10_14_R2_B_scaffold_3428_2

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(1220..1777)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-70 n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4C63 similarity UNIREF
DB: UNIREF100
  • Identity: 40.0
  • Coverage: 175.0
  • Bit_score: 119
  • Evalue 2.00e-24
RNA polymerase sigma-E factor {ECO:0000313|EMBL:EMI21058.1}; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.8
  • Coverage: 182.0
  • Bit_score: 111
  • Evalue 7.80e-22
RNA polymerase sigma-E factor similarity KEGG
DB: KEGG
  • Identity: 37.6
  • Coverage: 178.0
  • Bit_score: 109
  • Evalue 7.80e-22

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Taxonomy

Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9 → Singulisphaera → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 558
ATGTCGTCGCCCGCGACCGTCTTCGAGCCTGATCGCTACCGCGGATACCTCCTCGTCATCGTGCGGCGGAACTGGTCCGCCGCTCTCCAGTCTTACGGCGAGCCGGAGGATGTTGTGCAGTTAGCGATCATCGAGGCGATCCGCTGCGGCGACCAGTTCCGCGGACAGACGGCTGAAGAGTACCGGGGCTGGCTCGGTACGGTTCTTACCAACACGATCAAGGACATCGAGAAGCAGCAGTTGCGGAAGAAGCGCGACTACCGCCGCATCGGGCCGATCGAGGACGACGTGGGCCGCTCGTCGGACGCCCTGTGTCGGTTCGCGGCCGCCGGCCCGTCACCCAGCAGCGGCGCGGCGCAGGAGGAGGCGCTGCTGCGGTTGGCGGACGCCCTGGCCGGACTCCCGCTCGACCAGTTTTTGGCCGTCTCGCTACACCACCTCGACGGGCTGACGCTGAAGGAGACCGCCGAGCGGACGGGGCGGACGAAGGCGGCGGTGGCGGGGCACCTCCGCCGGGCGATGGAGACCCTCCGCGCGGTTCTGGGAGGCGGTCCGTGA
PROTEIN sequence
Length: 186
MSSPATVFEPDRYRGYLLVIVRRNWSAALQSYGEPEDVVQLAIIEAIRCGDQFRGQTAEEYRGWLGTVLTNTIKDIEKQQLRKKRDYRRIGPIEDDVGRSSDALCRFAAAGPSPSSGAAQEEALLRLADALAGLPLDQFLAVSLHHLDGLTLKETAERTGRTKAAVAGHLRRAMETLRAVLGGGP*