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SCN18_30_10_14_R2_B_scaffold_3428

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_3428_1
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(3..1223)
DNA (1221bp) protein (407aa)
Serine/threonine protein kinase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DFE4_SINAD
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:AGA27977.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_3428_2
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(1220..1777)
DNA (558bp) protein (186aa)
RNA polymerase subunit sigma-70 n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4C63
RNA polymerase sigma-E factor {ECO:0000313|EMBL:EMI21058.1}; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;"
RNA polymerase sigma-E factor
SCN18_30_10_14_R2_B_scaffold_3428_3
Acidovorax sp. KKS102_CN-SCN_Acidovorax_28x, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2350..2646
DNA (297bp) protein (99aa)
transposase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C46E9
transposase IS3/IS911 family protein
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:AEB84213.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCN18_30_10_14_R2_B_scaffold_3428_4
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

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2694..3509
DNA (816bp) protein (272aa)
transposase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C46E8
Uncharacterized protein {ECO:0000313|EMBL:KKK62842.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
integrase
SCN18_30_10_14_R2_B_scaffold_3428_5
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(3537..3890)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9VYP6_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ13071.1}; TaxID=1173022 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Crinalium.;" source="Crinalium epipsammum PCC 9333.;"
SCN18_30_10_14_R2_B_scaffold_3428_6
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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4378..5619
DNA (1242bp) protein (414aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5936
Integrase, catalytic core, phage domain protein {ECO:0000313|EMBL:EMI51931.1}; TaxID=1263870 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sallentina SM41.;"
integrase
SCN18_30_10_14_R2_B_scaffold_3428_7
SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, Verrucomicrobia

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comp(5929..7110)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AXP6_HERA2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX03460.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
SCN18_30_10_14_R2_B_scaffold_3428_8
unknown

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7640..9208
DNA (1569bp) protein (523aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_3428_9
unknown

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9297..9629
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4B42
Displaying 9 items

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