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SCN18_30_10_14_R2_B_scaffold_7382_4

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: 3475..4719

Top 3 Functional Annotations

Value Algorithm Source
type II secretion system protein, partial n=1 Tax=Burkholderia ubonensis RepID=UPI00016A3F1A similarity UNIREF
DB: UNIREF100
  • Identity: 31.9
  • Coverage: 335.0
  • Bit_score: 122
  • Evalue 5.40e-25
pilC; type IV pilus assembly protein PilC similarity KEGG
DB: KEGG
  • Identity: 36.0
  • Coverage: 339.0
  • Bit_score: 134
  • Evalue 5.10e-29
Type II secretion system (T2SS), F family protein {ECO:0000313|EMBL:AIO25075.1}; TaxID=983594 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia ATCC 25416.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 30.4
  • Coverage: 391.0
  • Bit_score: 124
  • Evalue 2.00e-25

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Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1245
ATGCGCGGCGCGATCCGAACTCTCCAGGTGCTCGGCCGGGTCGCTGGCGGGCTGCTCCTGCTCGCCGCGATGGCGTGGGGCGCCGGCGCCGGGCTGATCTTCGTCCTGTTCCTCCTGGTCGTCAACGGGTGGGCGGTGTACGCCTTCCTTCGCTACCGCCAGGGCGAACAGGACGAGCTCCTCGCGGTCCTCACGGCGACCGCGGAGGCGGGCCTGCCGCTGCCGTCGGGGGTCGAGGCGTTCCGTGCCGACCGGCGCCCGGGGCCGCTCGCGCCGGTCTCCCGCTGGCTGTCGTTCGCGGCCCTGCCGCTGTACGGCTACGCCCGGATCTGGCTCGGGTGGCGGCCGTTCGACCGCCTGCTCGCCGACCTCTCCGCCCGGCTCGAGACCGGCGAGCCGCTGTCGGCGGCGCTGCGGGACACCCCGGGCGTGGCGGCGCGGGAGGTCCGGCTGGCGGCGGCGGTCGGCGAGGCGACGGGGGCGGTCGGCCCGGCGCTCCGCGGCGCCGACCGCGAGCGGTGGTCGGCGGCGTGGCTGGAGGTCGCCCCGCGGCTCCTCTACCCGCTCCTGGTCTTGCTCTTCGTGTCGGCGCTGACCACGTTCCTGATGGTCTTCATCGTCCCGCGGTTCAAGAAAATCTTCGACGAGTTCGGTCAGCCACTCCCGGAATCGACGCAGCACCTCGTCGCGGCGTGGGAGGCGGTCGAGGACTTCCTCCCGCTCATCGCCCCCGGGGTGGTCCTGCTGCTGACCGCGCTGGCCGCGGTGGTCGCCAACCCGACCCTCCGGTGGCACACGCCGCTGCTCGGCCGGCTGTACCGGTGGGGCGTGCAAGCGGAAGTGTTGCGGACGCTCGGCCGCCTCCTCGCGGTGGGCCAAACCGTGCCCCAGGCGCTGGCGTTCCTCGGCGAGTCCCGCGACCTGCCGGCGGTGGTCCGGCGGCGGGTCGCGGCGGCCGCGGCCGGGGTCGGGCGCGGCGACCCGCTGGACGCGAGCCTGCGGGCGGCCAGGCTGCGCCCGGCGCCGATGGCCCCGCTGGTCCGGGCGTCCGAGCGGGTGCTGCGCCTGCCGTGGGCCCTGGTCGAGCTCGGCGACCACCTCGCCGGCCGCGCCTTCCGGGTCGTCCGCCGGCTGTCGCTGGTGCTGTCCCCGCTGCTGGTCCTCGCGGTCGGGGCGGTGGTCGCGTTCATCGCCCTCGCCATGTTCCTCCCACTCGTCCACCTCATCACGAGCCTGAGCGAATGA
PROTEIN sequence
Length: 415
MRGAIRTLQVLGRVAGGLLLLAAMAWGAGAGLIFVLFLLVVNGWAVYAFLRYRQGEQDELLAVLTATAEAGLPLPSGVEAFRADRRPGPLAPVSRWLSFAALPLYGYARIWLGWRPFDRLLADLSARLETGEPLSAALRDTPGVAAREVRLAAAVGEATGAVGPALRGADRERWSAAWLEVAPRLLYPLLVLLFVSALTTFLMVFIVPRFKKIFDEFGQPLPESTQHLVAAWEAVEDFLPLIAPGVVLLLTALAAVVANPTLRWHTPLLGRLYRWGVQAEVLRTLGRLLAVGQTVPQALAFLGESRDLPAVVRRRVAAAAAGVGRGDPLDASLRAARLRPAPMAPLVRASERVLRLPWALVELGDHLAGRAFRVVRRLSLVLSPLLVLAVGAVVAFIALAMFLPLVHLITSLSE*