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SCN18_30_10_14_R2_B_scaffold_7382

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_7382_1
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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1..717
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C467E
FG-GAP repeat-containing protein
Tax=CG_Falkow_04
SCN18_30_10_14_R2_B_scaffold_7382_2
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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1166..2377
DNA (1212bp) protein (404aa)
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB n=2 Tax=Singulisphaera acidiphila RepID=L0DMJ8_SINAD
type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB {ECO:0000313|EMBL:AGA30477.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_7382_3
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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2431..3471
DNA (1041bp) protein (347aa)
type II secretion system protein F n=1 Tax=Oceanimonas smirnovii RepID=UPI000360C3FD
type IV pilus biogenesis protein PilC
Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
SCN18_30_10_14_R2_B_scaffold_7382_4
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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3475..4719
DNA (1245bp) protein (415aa)
type II secretion system protein, partial n=1 Tax=Burkholderia ubonensis RepID=UPI00016A3F1A
pilC; type IV pilus assembly protein PilC
Type II secretion system (T2SS), F family protein {ECO:0000313|EMBL:AIO25075.1}; TaxID=983594 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia ATCC 25416.;"
SCN18_30_10_14_R2_B_scaffold_7382_5
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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4716..5138
DNA (423bp) protein (141aa)
SCN18_30_10_14_R2_B_scaffold_7382_6
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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5135..5638
DNA (504bp) protein (168aa)
SCN18_30_10_14_R2_B_scaffold_7382_7
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5635..6066
DNA (432bp) protein (144aa)
SCN18_30_10_14_R2_B_scaffold_7382_8
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(6338..7201)
DNA (864bp) protein (288aa)
hypothetical protein, partial n=1 Tax=Zavarzinella formosa RepID=UPI00035E66DA
Displaying 8 items

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