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SCN18_30_10_14_R2_B_scaffold_5585_1

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: 117..689

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CV19_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 91.1
  • Coverage: 190.0
  • Bit_score: 329
  • Evalue 1.30e-87
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 91.1
  • Coverage: 190.0
  • Bit_score: 329
  • Evalue 3.80e-88
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEA27488.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.1
  • Coverage: 190.0
  • Bit_score: 329
  • Evalue 1.90e-87

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Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 573
ATGAGTGAGACGACAGACGTTCCCGACGAGCTGGTGGCCCTTGCGATGGCAGGGGACCGCGGAGCGGTAGGGCACGTGCTCGCCATCATCCGGCCCATGGTCGTGCGGTACTGCCGTGCGCGCCTCGGTCGGTTGGACCGTGCGTCGGTCTCCGCCGACGACGTCGCGCAGGAGGTGTGTTTGGCCGTACTCACGGCCTTGCCCGGCTATCGCGTCCAGGGCCGCCCGTTCCTGGCGTTCGTCTACGGCATCGCGTCGCACAAGGTGATCGACGCGCACCGTGCGGCCACCCGCAACCGGTCGGAACCGGTCGCGGAAGTGCCCGACTCCGTGGAGACCGGAGACGGACCGGAACAGCGCGCCCTGCGCGTCGAACTGTCCGGCGAGATGGCAACCCTGCTCGAGACGCTCCCCGACAAGCAACGAGAGATCCTGGTGTTACGCGTGGTCGTCGGACTCTCCGCCGAGGAAACGGCGGAGGCGGTCGGATCCACACCCGGCGCTGTCCGGGTGGCCCAGCACCGCGCCCTGGCGCGGTTGCGCAAGTCGATGCCCGAAGAGGAGGTGGTCTGA
PROTEIN sequence
Length: 191
MSETTDVPDELVALAMAGDRGAVGHVLAIIRPMVVRYCRARLGRLDRASVSADDVAQEVCLAVLTALPGYRVQGRPFLAFVYGIASHKVIDAHRAATRNRSEPVAEVPDSVETGDGPEQRALRVELSGEMATLLETLPDKQREILVLRVVVGLSAEETAEAVGSTPGAVRVAQHRALARLRKSMPEEEVV*