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SCN18_30_10_14_R2_B_scaffold_5585

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_5585_1
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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117..689
DNA (573bp) protein (191aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CV19_PSEUX
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEA27488.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCN18_30_10_14_R2_B_scaffold_5585_2
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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690..1793
DNA (1104bp) protein (368aa)
DNA methylase, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IPX5_RHOCS
Uncharacterized protein {ECO:0000313|EMBL:KKK60167.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
DNA methylase
SCN18_30_10_14_R2_B_scaffold_5585_3
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1706..2209)
DNA (504bp) protein (168aa)
SCN18_30_10_14_R2_B_scaffold_5585_4
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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2269..3729
DNA (1461bp) protein (487aa)
Uncharacterized protein n=1 Tax=Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 / I-0) RepID=H8GX87_DEIGI
Uncharacterized protein {ECO:0000313|EMBL:EYB67032.1}; TaxID=1476583 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus phoenicis.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_5585_5
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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3829..4143
DNA (315bp) protein (105aa)
SCN18_30_10_14_R2_B_scaffold_5585_6
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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4476..4769
DNA (294bp) protein (98aa)
RNA-binding protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C45B3
RNA-binding region RNP-1 {ECO:0000313|EMBL:BAL53816.1}; TaxID=120965 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; environmental samples.;" source="uncultured planctomycete.;"
RNP-1 like RNA-binding protein
SCN18_30_10_14_R2_B_scaffold_5585_7
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4861..5253)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Pseudanabaena sp. PCC 6802 RepID=UPI0003803AD3
SCN18_30_10_14_R2_B_scaffold_5585_8
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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5475..5759
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5072
SCN18_30_10_14_R2_B_scaffold_5585_trna_1
unknown

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comp(6242..6314)
DNA (73bp)
transferRNA Ile
SCN18_30_10_14_R2_B_scaffold_5585_9
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(6320..6547)
DNA (228bp) protein (76aa)
translation initiation factor IF-1 n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5230
infA; putative translation initiation factor IF-1
Tax=RBG_16_Actinobacteria_68_12_curated
Displaying 10 items

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