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SCN18_30_10_14_R2_B_Bacteria_71_11

In projects: SCN18_30_10_14_R2_B  |  scn18_genomes  |  SCN_ET-SeqDB_Dereplicated  |  SCN_92

Consensus taxonomy: Bacteria

Description

No idea what to make of this bin SCN18_30_10_14_R2_B_concoct_074. May be mixed components. 16S rRNA in bin places with Planctomycetes Gemmataceae

Displaying items 701-750 of 766 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCN18_30_10_14_R2_B_scaffold_17697
Species: Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9 (50%)
2 2633 bp 73.38 9.34 95.59
SCN18_30_10_14_R2_B_scaffold_12209
Species: SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241 (50%)
2 3542 bp 62.82 11.73 91.98
SCN18_30_10_14_R2_B_scaffold_44379
Species: Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9 (50%)
2 1287 bp 72.80 8.74 90.91
SCN18_30_10_14_R2_B_scaffold_6716
Species: Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x (100%)
2 5652 bp 69.76 12.00 94.59
SCN18_30_10_14_R2_B_scaffold_17445
Species: Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9 (50%)
2 2661 bp 70.54 8.06 82.41
SCN18_30_10_14_R2_B_scaffold_7997
Species: SCNpilot_BF_INOC_Parabacteroides_41_8 (50%)
2 4928 bp 70.98 11.84 88.51
SCN18_30_10_14_R2_B_scaffold_14851
Species: Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x (100%)
2 3017 bp 74.11 14.67 89.69
SCN18_30_10_14_R2_B_scaffold_12996
Species: Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9 (100%)
2 3363 bp 72.82 10.66 92.06
SCN18_30_10_14_R2_B_scaffold_23005
Species: SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 (50%)
2 3129 bp 71.40 9.25 90.80
SCN18_30_10_14_R2_B_scaffold_11847
Species: Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x (100%)
2 3627 bp 78.25 9.80 94.54
SCN18_30_10_14_R2_B_scaffold_21772
Species: SCNpilot_BF_INOC_Sphingobacteriales_46_9 (50%)
2 2246 bp 73.69 13.49 84.68
SCN18_30_10_14_R2_B_scaffold_26298
Species: CN-SCN_Rubrivivax_131x (100%)
2 1937 bp 78.83 11.46 100.21
SCN18_30_10_14_R2_B_scaffold_5855
Species: SCN_Thiomonas_15x (50%)
2 6321 bp 75.72 10.28 96.96
SCN18_30_10_14_R2_B_scaffold_17493
Species: CN-SCN_Microbacterium_18x (100%)
2 2657 bp 71.13 8.98 95.52
SCN18_30_10_14_R2_B_scaffold_19488
Species: Streptomyces vietnamensis (50%)
2 2446 bp 72.94 9.93 82.30
SCN18_30_10_14_R2_B_scaffold_18659
Species: SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7 (50%)
2 2526 bp 72.49 10.51 75.30
SCN18_30_10_14_R2_B_scaffold_22589
Species: SCNpilot_P_inoc_Acidovorax_64_34 (50%)
2 2183 bp 74.62 9.48 87.95
SCN18_30_10_14_R2_B_scaffold_26317
Species: Sorangium cellulosum (50%)
2 1935 bp 69.41 10.47 73.18
SCN18_30_10_14_R2_B_scaffold_17761
Species: Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9 (50%)
2 2624 bp 69.63 12.46 64.94
SCN18_30_10_14_R2_B_scaffold_19754
Species: SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150 (50%)
2 2421 bp 68.94 15.43 90.83
SCN18_30_10_14_R2_B_scaffold_24165
Species: Dyadobacter fermentans_SCNpilot_P_inoc_Dyadobacter_48_40 (50%)
2 2069 bp 70.23 10.15 80.04
SCN18_30_10_14_R2_B_scaffold_56382
Species: Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9 (100%)
1 1063 bp 71.87 11.43 65.48
SCN18_30_10_14_R2_B_scaffold_51574
Species: SCNPILOT_CONT_1000_BF_Chloroflexi_54_27 (100%)
1 1142 bp 76.71 9.85 75.13
SCN18_30_10_14_R2_B_scaffold_20232
Species: SCNPILOT_EXPT_300_BF_Sphingomonas_67_13 (100%)
1 2377 bp 72.44 10.98 99.96
SCN18_30_10_14_R2_B_scaffold_27578
Species: Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9 (100%)
1 1868 bp 68.84 9.88 99.89
SCN18_30_10_14_R2_B_scaffold_21053
Species: SCNpilot_BF_INOC_Bordetella_67_10 (100%)
1 3426 bp 73.70 13.40 100.00
SCN18_30_10_14_R2_B_scaffold_54106
Species: CN-SCN_Lautropia_15x (100%)
1 1099 bp 69.70 7.78 99.91
SCN18_30_10_14_R2_B_scaffold_34936
Species: Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9 (100%)
1 1555 bp 77.36 10.32 99.74
SCN18_30_10_14_R2_B_scaffold_29890
Species: Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9 (100%)
1 1754 bp 73.66 8.21 74.74
SCN18_30_10_14_R2_B_scaffold_12330
Species: Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x (100%)
1 7814 bp 74.65 10.21 99.97
SCN18_30_10_14_R2_B_scaffold_11949
Species: SCNPILOT_CONT_1000_BF_Chloroflexi_54_27 (100%)
1 3605 bp 74.65 10.44 99.61
SCN18_30_10_14_R2_B_scaffold_7615
Species: Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x (100%)
1 5111 bp 76.09 12.18 99.96
SCN18_30_10_14_R2_B_scaffold_44776
Species: Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9 (100%)
1 1278 bp 74.41 10.80 87.79
SCN18_30_10_14_R2_B_scaffold_38665
Species: SCNPILOT_CONT_1000_BF_Chloroflexi_54_27 (100%)
1 1435 bp 73.59 9.72 66.06
SCN18_30_10_14_R2_B_scaffold_57215
Species: Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9 (100%)
1 1050 bp 71.05 6.14 84.29
SCN18_30_10_14_R2_B_scaffold_38417
Species: Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9 (100%)
1 1443 bp 79.07 7.80 99.79
SCN18_30_10_14_R2_B_scaffold_27919
Species: SCNPILOT_CONT_1000_BF_Chloroflexi_54_27 (100%)
1 1851 bp 78.55 8.59 99.84
SCN18_30_10_14_R2_B_scaffold_39619
Species: Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9 (100%)
1 1407 bp 68.23 9.28 87.42
SCN18_30_10_14_R2_B_scaffold_49415
Species: SCNPILOT_CONT_500_BF_Actinomycetales_73_43 (100%)
1 1181 bp 80.86 10.41 99.83
SCN18_30_10_14_R2_B_scaffold_53835
Species: CN-SCN_Erythrobacter_14x (100%)
1 1103 bp 72.98 8.43 94.92
SCN18_30_10_14_R2_B_scaffold_25370
Species: SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 (100%)
1 1989 bp 74.21 7.16 100.00
SCN18_30_10_14_R2_B_scaffold_58571
Species: Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9 (100%)
1 1030 bp 68.83 9.61 99.90
SCN18_30_10_14_R2_B_scaffold_20875
Species: Enterobacter cloacae_SCNPILOT_CONT_500_P_Enterobacter_55_6.1 (100%)
1 2322 bp 72.09 10.92 100.00
SCN18_30_10_14_R2_B_scaffold_20375
Species: Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9 (100%)
1 2365 bp 77.46 7.74 99.96
SCN18_30_10_14_R2_B_scaffold_50817
Species: Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9 (100%)
1 1155 bp 74.81 8.18 99.74
SCN18_30_10_14_R2_B_scaffold_49969
Species: Azotobacter chroococcum (100%)
1 1171 bp 66.01 23.06 49.44
SCN18_30_10_14_R2_B_scaffold_37494
Species: Dyadobacter fermentans_SCNpilot_P_inoc_Dyadobacter_48_40 (100%)
1 1471 bp 71.45 11.83 75.46
SCN18_30_10_14_R2_B_scaffold_38758
Species: SCNPILOT_CONT_1000_BF_Chloroflexi_54_27 (100%)
1 1917 bp 65.99 6.81 95.46
SCN18_30_10_14_R2_B_scaffold_45455
Species: SCNPILOT_EXPT_300_BF_Actinomycetales_72_7_partial (100%)
1 1262 bp 75.36 7.84 95.32
SCN18_30_10_14_R2_B_scaffold_59492
Species: Rhodanobacter denitrificans_SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_69_165 (100%)
1 1017 bp 70.11 7.67 86.73
Displaying items 701-750 of 766 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.