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SCN18_30_10_14_R2_B_scaffold_4201

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_4201_1
unknown

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comp(1..60)
DNA (60bp) protein (20aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_4201_2
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(229..1233)
DNA (1005bp) protein (335aa)
Gluconolactonase n=1 Tax=uncultured bacterium BLR3 RepID=C0IN59_9BACT
Methylobacterium aquaticum DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ46440.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
putative gluconolactonase
SCN18_30_10_14_R2_B_scaffold_4201_3
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1250..2653)
DNA (1404bp) protein (468aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoamide dehydrogenase n=1 Tax=Asticcacaulis sp. AC466 RepID=V4P7P9_9CAUL
SCN18_30_10_14_R2_B_scaffold_4201_4
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2650..3900)
DNA (1251bp) protein (417aa)
bkdB; Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC:2.3.1.168)
Branched-chain alpha-keto acid dehydrogenase subunit E2 n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HMK1_PSEUO
Branched-chain alpha-keto acid dehydrogenase subunit E2 {ECO:0000313|EMBL:KJR64098.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
SCN18_30_10_14_R2_B_scaffold_4201_5
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3902..4906)
DNA (1005bp) protein (335aa)
bkdA2; 2-oxoisovalerate dehydrogenase subunit beta (EC:1.2.4.4)
2-oxoisovalerate dehydrogenase, E1 component, beta subunit n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZGV8_9GAMM
2-oxoisovalerate dehydrogenase, E1 component, beta subunit {ECO:0000313|EMBL:EIT71129.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
SCN18_30_10_14_R2_B_scaffold_4201_6
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4918..6150)
DNA (1233bp) protein (411aa)
bkdA1; 2-oxoisovalerate dehydrogenase alpha subunit (EC:1.2.4.4)
2-oxoisovalerate dehydrogenase subunit alpha n=1 Tax=Sphingobium ummariense RL-3 RepID=T0IZH7_9SPHN
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCN18_30_10_14_R2_B_scaffold_4201_7
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6396..8024
DNA (1629bp) protein (543aa)
Tat pathway signal sequence domain protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A1X9_9PROT
Putative D,D-dipeptide-binding periplasmic protein DdpA {ECO:0000313|EMBL:CEJ14956.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
putative dipeptide ABC transporter
SCN18_30_10_14_R2_B_scaffold_4201_8
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8032..8160
DNA (129bp) protein (43aa)
Putative dipeptide ABC transporter, permease protein DppB n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A1Y2_9PROT
Putative D,D-dipeptide transport system permease protein DdpB {ECO:0000313|EMBL:CEJ14962.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
Displaying 8 items

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