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SCN18_30_10_14_R2_B_scaffold_4280

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_4280_1
unknown

Not on your lists

comp(3..65)
DNA (63bp) protein (21aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_4280_2
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(173..1201)
DNA (1029bp) protein (343aa)
Methionine synthase, vitamin-B12 independent n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZUZ6_9PROT
Methionine synthase, vitamin-B12 independent {ECO:0000313|EMBL:EHM03163.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase
SCN18_30_10_14_R2_B_scaffold_4280_3
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1208..2113)
DNA (906bp) protein (302aa)
Dioxygenase {ECO:0000313|EMBL:EFH13674.1}; EC=1.13.11.37 {ECO:0000313|EMBL:EFH13674.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
chqB; hydroxyquinol 1,2-dioxygenase (EC:1.13.11.37)
Dioxygenase n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RGA4_9PROT
SCN18_30_10_14_R2_B_scaffold_4280_4
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2151..3077)
DNA (927bp) protein (309aa)
Sterol desaturase family protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BS98_GRABC
Sterol desaturase family protein
Sterol desaturase family protein {ECO:0000313|EMBL:ABI62304.1}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
SCN18_30_10_14_R2_B_scaffold_4280_5
unknown

Not on your lists

comp(3080..3217)
DNA (138bp) protein (46aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_4280_6
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3228..4163)
DNA (936bp) protein (312aa)
PGRS-subfamily of Gly-rich proteins n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BS99_GRABC
Uncharacterized protein {ECO:0000313|EMBL:GAN77570.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
PGRS-subfamily of Gly-rich protein
SCN18_30_10_14_R2_B_scaffold_4280_7
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4218..5627)
DNA (1410bp) protein (470aa)
O-antigen polymerase family protein n=2 Tax=Acidiphilium RepID=F0J5Y9_ACIMA
O-antigen polymerase family protein
O-antigen polymerase family protein {ECO:0000313|EMBL:BAJ82533.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
SCN18_30_10_14_R2_B_scaffold_4280_8
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5750..6598
DNA (849bp) protein (283aa)
Urease accessory protein UreD n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4YZJ4_SPHJU
ureD; urease accessory protein
Urease accessory protein UreD {ECO:0000256|HAMAP-Rule:MF_01384}; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum (strain NBRC 101211 / UT26S).;"
SCN18_30_10_14_R2_B_scaffold_4280_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6611..6913
DNA (303bp) protein (101aa)
Urease subunit gamma {ECO:0000256|HAMAP-Rule:MF_00739, ECO:0000256|RuleBase:RU003850}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_00739, ECO:0000256|RuleBase:RU003850};; Urea amidohydrolase subunit gamma {ECO:0000256|HAMAP-Rule:MF_00739}; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R2-400B4.;"
Urease subunit gamma n=1 Tax=Rhizobium sp. RepID=L0NJ09_RHISP
ureA; urease subunit gamma UreA
SCN18_30_10_14_R2_B_scaffold_4280_10
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6910..7215
DNA (306bp) protein (102aa)
Urease subunit beta {ECO:0000256|HAMAP-Rule:MF_01954}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_01954};; Urea amidohydrolase subunit beta {ECO:0000256|HAMAP-Rule:MF_01954}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
ureB; urease subunit beta (EC:3.5.1.5)
urease subunit beta n=1 Tax=Methylosarcina fibrata RepID=UPI00037E11D8
SCN18_30_10_14_R2_B_scaffold_4280_11
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7218..8036
DNA (819bp) protein (273aa)
Urease subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_01953, ECO:0000256|SAAS:SAAS00033844};; Urea amidohydrolase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
Urease subunit alpha n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YND9_9PROT
urease alpha subunit
Displaying 11 items

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