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SCN18_30_10_14_R2_B_scaffold_2431

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_2431_1
SCNpilot_P_inoc_Stenotrophomonas_69_27, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(86..1021)
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003668E94
nucleoside-diphosphate-sugar epimerase
Tax=RBG_16_Chloroflexi_56_11_curated
SCN18_30_10_14_R2_B_scaffold_2431_2
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1046..2722)
DNA (1677bp) protein (559aa)
Putative Thiamine pyrophosphate-requiring enzyme; Benzoylformate decarboxylase id=2521454 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
SCN18_30_10_14_R2_B_scaffold_2431_3
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2850..4667
DNA (1818bp) protein (606aa)
Uncharacterized protein n=2 Tax=Methylobacterium extorquens RepID=C5AX22_METEA
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EHP92225.1}; Flags: Precursor;; TaxID=882800 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens DSM 13060.;"
SCN18_30_10_14_R2_B_scaffold_2431_4
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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4680..5474
DNA (795bp) protein (265aa)
putative short-chain alcohol dehydrogenase (EC:1.1.1.30)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Burkholderia terrae BS001 RepID=I5D0M4_9BURK
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EIN01693.1}; TaxID=1171375 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia terrae BS001.;"
SCN18_30_10_14_R2_B_scaffold_2431_5
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5483..6667)
DNA (1185bp) protein (395aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D2D48D
Strain MEJ076 contig_5, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ04236.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
related to citrate synthase
SCN18_30_10_14_R2_B_scaffold_2431_6
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6757..7266
DNA (510bp) protein (170aa)
Putative uncharacterized protein n=1 Tax=Methylocapsa acidiphila RepID=Q2VNH6_METAI
Putative uncharacterized protein {ECO:0000313|EMBL:CAJ01656.1}; TaxID=133552 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocapsa.;" source="Methylocapsa acidiphila.;"
DinB family protein
SCN18_30_10_14_R2_B_scaffold_2431_7
unknown

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comp(7291..7533)
DNA (243bp) protein (81aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_2431_8
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7631..8914)
DNA (1284bp) protein (428aa)
TRAP-type C4-dicarboxylate transport system, large permease component id=4555514 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
TRAP transporter subunit DctM
Tax=GWC2_Rokubacteria_70_16_curated
SCN18_30_10_14_R2_B_scaffold_2431_9
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8918..9421)
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Gracilibacillus lacisalsi RepID=UPI00038127AD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
SCN18_30_10_14_R2_B_scaffold_2431_10
Paracoccus sp. 361_CN-SCN_Paracoccus_21x, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9418..10458)
DNA (1041bp) protein (347aa)
TRAP dicarboxylate transporter subunit DctP n=1 Tax=Halomonas sp. HAL1 RepID=G4F1H5_9GAMM
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:KFF48183.1}; TaxID=1492922 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MFB021.;"
C4-dicarboxylate ABC transporter substrate-binding protein
SCN18_30_10_14_R2_B_scaffold_2431_11
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10566..11378
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GVP5_PUSST
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCN18_30_10_14_R2_B_scaffold_2431_12
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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11453..12532
DNA (1080bp) protein (360aa)
Acyl-CoA synthetase family protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BU14_GRABC
AMP-dependent synthetase {ECO:0000313|EMBL:KFA91020.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
acyl-CoA synthetase
Displaying 12 items

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