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SCN18_30_10_14_R2_B_scaffold_321

Search features with annotation key words

Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_321_1
unknown

Not on your lists

1..204
DNA (204bp) protein (68aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_321_2
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(436..1311)
DNA (876bp) protein (292aa)
Efflux transporter, RND family n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y0G5_9PROT
Efflux transporter, RND family {ECO:0000313|EMBL:EGY00994.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
secretion protein HlyD family protein
SCN18_30_10_14_R2_B_scaffold_321_3
SCNPILOT_CONT_750_P_Burkholderiales_64_62, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1308..1520)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A5L2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EHL97507.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
membrane protein, putative
SCN18_30_10_14_R2_B_scaffold_321_4
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1517..3577)
DNA (2061bp) protein (687aa)
fusaric acid transporter n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037751B4
Uncharacterized protein {ECO:0000313|EMBL:KGJ69406.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_321_5
unknown

Not on your lists

3664..3810
DNA (147bp) protein (49aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_321_6
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3785..4549)
DNA (765bp) protein (255aa)
short chain dehydrogenase (EC:1.-.-.-)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037CCC20
Tax=RBG_16_Betaproteobacteria_64_18_curated
SCN18_30_10_14_R2_B_scaffold_321_7
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4579..5751)
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00030ECD10
Drug resistance transporter, Bcr/CflA subfamily {ECO:0000313|EMBL:EFH09082.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
Bcr family multidrug resistance transporter
SCN18_30_10_14_R2_B_scaffold_321_8
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5778..6794
DNA (1017bp) protein (339aa)
Mannokinase (EC:2.7.1.7)
Mannokinase {ECO:0000313|EMBL:AHJ61967.1}; EC=2.7.1.7 {ECO:0000313|EMBL:AHJ61967.1};; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
Mannokinase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVN7_GRABC
SCN18_30_10_14_R2_B_scaffold_321_9
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6796..8049
DNA (1254bp) protein (418aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
DNA polymerase IV (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RKV5_9PROT
SCN18_30_10_14_R2_B_scaffold_321_10
Rhodanobacter spathiphylli_SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_34, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8114..8881)
DNA (768bp) protein (256aa)
UPI0003CDF069 related cluster n=1 Tax=unknown RepID=UPI0003CDF069
Uncharacterized protein {ECO:0000313|EMBL:ESX37977.1}; TaxID=1287298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC426A00.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_321_11
unknown

Not on your lists

comp(8893..9525)
DNA (633bp) protein (211aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_321_12
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9522..9935)
DNA (414bp) protein (138aa)
Uncharacterized protein {ECO:0000313|EMBL:EXI83052.1}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
SCN18_30_10_14_R2_B_scaffold_321_13
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10558..11352)
DNA (795bp) protein (265aa)
Putative uncharacterized protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVP1_GRABC
Uncharacterized protein {ECO:0000313|EMBL:GAN78389.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
Hypothetical protein
SCN18_30_10_14_R2_B_scaffold_321_14
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11421..13214)
DNA (1794bp) protein (598aa)
Aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVP2_GRABC
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:GAN75957.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCN18_30_10_14_R2_B_scaffold_321_15
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13355..13795
DNA (441bp) protein (147aa)
Uncharacterized conserved protein n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SZE8_JANMA
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:ABR90186.1}; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis).;"
SCN18_30_10_14_R2_B_scaffold_321_16
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13847..15031
DNA (1185bp) protein (395aa)
Ribonuclease D {ECO:0000256|HAMAP-Rule:MF_01899}; Short=RNase D {ECO:0000256|HAMAP-Rule:MF_01899};; EC=3.1.13.5 {ECO:0000256|HAMAP-Rule:MF_01899};; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
Ribonuclease D (EC:3.1.13.5)
Ribonuclease D n=2 Tax=Granulibacter bethesdensis RepID=RND_GRABC
SCN18_30_10_14_R2_B_scaffold_321_17
unknown

Not on your lists

15165..15305
DNA (141bp) protein (47aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_321_18
CN-SCN_Phenylobacterium_14x, CN-SCN_Phenylobacterium_14x, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15533..16087
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YVQ9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFG69079.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_321_19
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16397..17896
DNA (1500bp) protein (500aa)
katA; catalase (EC:1.11.1.6)
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; TaxID=1247726 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella mimigardefordensis DPN7.;"
Catalase n=1 Tax=Advenella kashmirensis W13003 RepID=V8QMU1_9BURK
SCN18_30_10_14_R2_B_scaffold_321_20
SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17968..18729
DNA (762bp) protein (254aa)
Beta-phosphoglucomutase n=1 Tax=Rhodovulum sp. PH10 RepID=J6J2Y7_9RHOB
Beta-phosphoglucomutase {ECO:0000313|EMBL:EJW11105.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
beta-phosphoglucomutase family hydrolase
SCN18_30_10_14_R2_B_scaffold_321_21
SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18734..21145)
DNA (2412bp) protein (804aa)
Kojibiose phosphorylase {ECO:0000313|EMBL:ACB78711.1}; EC=2.4.1.230 {ECO:0000313|EMBL:ACB78711.1};; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
Kojibiose phosphorylase n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZK59_METPB
kojibiose phosphorylase
SCN18_30_10_14_R2_B_scaffold_321_22
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21511..21942
DNA (432bp) protein (144aa)
Putative membrane protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YS31_9RHIZ
Putative membrane protein {ECO:0000313|EMBL:EIM26773.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_321_23
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21942..23282
DNA (1341bp) protein (447aa)
Glucose/sorbosone dehydrogenase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YS30_9RHIZ
Glucose/sorbosone dehydrogenase {ECO:0000313|EMBL:EIM26772.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
glucose/sorbosone dehydrogenase
SCN18_30_10_14_R2_B_scaffold_321_24
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23302..23664)
DNA (363bp) protein (121aa)
Ph adaptation potassium efflux system protein G n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ASN6_AZOBR
Monovalent cation/H+ antiporter subunit G {ECO:0000313|EMBL:KJR61771.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
monovalent cation/H+ antiporter subunit G
SCN18_30_10_14_R2_B_scaffold_321_25
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23661..23942)
DNA (282bp) protein (94aa)
Ph adaptation potassium efflux system protein F n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ASN7_AZOBR
Cation:proton antiporter {ECO:0000313|EMBL:KJB94734.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
monovalent cation/H+ antiporter subunit F
SCN18_30_10_14_R2_B_scaffold_321_26
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23939..24427)
DNA (489bp) protein (163aa)
Multisubunit potassium/proton antiporter, PhaE subunit n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPJ1_NITHX
Cation:proton antiporter {ECO:0000313|EMBL:KJB91660.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
monovalent cation/H+ antiporter subunit E
SCN18_30_10_14_R2_B_scaffold_321_27
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24424..26064)
DNA (1641bp) protein (547aa)
Putative monovalent cation/H+ antiporter subunit D n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A335_9PROT
Cation:proton antiporter {ECO:0000313|EMBL:KJB91661.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
monovalent cation/H+ antiporter subunit D
SCN18_30_10_14_R2_B_scaffold_321_28
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26073..26417)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BLD3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAR23121.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
phaC; monovalent cation/H+ antiporter subunit C
SCN18_30_10_14_R2_B_scaffold_321_29
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26417..29350)
DNA (2934bp) protein (978aa)
pH adaptation potassium efflux system transmembrane protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZDE0_AZOL4
Cation:proton antiporter {ECO:0000313|EMBL:KJB91663.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
monovalent cation/H+ antiporter subunit A
SCN18_30_10_14_R2_B_scaffold_321_30
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29350..29817)
DNA (468bp) protein (156aa)
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A332_9PROT
Nitrogen regulatory protein {ECO:0000313|EMBL:KJB91664.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
ptsN1; nitrogen regulatory protein
Displaying items 1-30 of 81 in total

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