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SCN18_30_10_14_R2_B_scaffold_394

Search features with annotation key words

Displaying items 1-30 of 240 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_394_1
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..518)
DNA (516bp) protein (172aa)
Putative uncharacterized protein n=1 Tax=Acidiphilium sp. PM RepID=F7S922_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EGO94351.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
transposase of ISBst12-like element
SCN18_30_10_14_R2_B_scaffold_394_2
SCNPILOT_CONT_750_P_Mesorhizobium_63_10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

671..1354
DNA (684bp) protein (228aa)
Winged helix family two component transcriptional regulator n=1 Tax=Pseudomonas stutzeri KOS6 RepID=K6BRA6_PSEST
DNA-binding response regulator in two-component regulatory system with QseC {ECO:0000313|EMBL:CDX21981.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
transcriptional regulator
SCN18_30_10_14_R2_B_scaffold_394_3
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1396..2535
DNA (1140bp) protein (380aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
Signal transduction histidine kinase n=1 Tax=Pseudomonas stutzeri DSM 10701 RepID=I6Z7X9_PSEST
Signal transduction histidine kinase
SCN18_30_10_14_R2_B_scaffold_394_4
SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3133..4461
DNA (1329bp) protein (443aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI0003625A2B
Putative secretion protein {ECO:0000313|EMBL:EZP52697.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
transporter
SCN18_30_10_14_R2_B_scaffold_394_5
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4458..5564
DNA (1107bp) protein (369aa)
RND transporter n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CD17B
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:EJU13910.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
RND family efflux transporter MFP subunit
SCN18_30_10_14_R2_B_scaffold_394_6
SCN_Rubrivivax_15x, SCN_Rubrivivax_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5561..8677
DNA (3117bp) protein (1039aa)
Acriflavin resistance protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8SM89_9SPHN
Efflux system protein/acriflavin resistance protein {ECO:0000313|EMBL:GAN78391.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
transporter
SCN18_30_10_14_R2_B_scaffold_394_7
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9079..9552
DNA (474bp) protein (158aa)
Transcriptional regulator n=3 Tax=Acidiphilium RepID=A5FVL1_ACICJ
MarR family transcriptional regulator
MarR family transcriptional regulator {ECO:0000313|EMBL:KDM68671.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
SCN18_30_10_14_R2_B_scaffold_394_8
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9703..12939)
DNA (3237bp) protein (1079aa)
RND divalent metal cation efflux transporter CzcA n=1 Tax=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) RepID=C5B6P5_METEA
RND divalent metal cation efflux transporter CzcA {ECO:0000313|EMBL:ACS44127.1}; TaxID=272630 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1).;"
czcA2; RND divalent metal cation efflux transporter CzcA
SCN18_30_10_14_R2_B_scaffold_394_9
SCNPILOT_EXPT_750_BF_Plasmid_61_16, SCNPILOT_EXPT_750_BF_Plasmid_61_16, SCNPILOT_EXPT_750_BF_Plasmid_61_16, SCNPILOT_EXPT_750_BF_Plasmid_61_16, SCNPILOT_EXPT_750_BF_Plasmid_61_16, Plasmid-like

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comp(12952..14196)
DNA (1245bp) protein (415aa)
Putative secretion protein, putative RND family efflux protein n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7C864_METED
RND family efflux protein {ECO:0000313|EMBL:GAN46197.1}; TaxID=1604132 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. ME121.;"
secretion protein , RND family efflux protein
SCN18_30_10_14_R2_B_scaffold_394_10
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14313..15689)
DNA (1377bp) protein (459aa)
UPI0003CE6F45 related cluster n=1 Tax=unknown RepID=UPI0003CE6F45
Cobalt transporter {ECO:0000313|EMBL:ESW67105.1}; TaxID=1287334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC277A00.;"
transmembrane efflux protein
SCN18_30_10_14_R2_B_scaffold_394_11
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15698..15979)
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Ochrobactrum anthropi RepID=UPI000287ECB3
Nickel-resistant pritein NirB {ECO:0000313|EMBL:ESZ11273.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_394_12
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16162..16620)
DNA (459bp) protein (153aa)
Transcriptional regulator, MerR family n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RGC1_9PROT
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EFH13635.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
zntR; MerR family transcriptional regulator
SCN18_30_10_14_R2_B_scaffold_394_13
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16671..19037
DNA (2367bp) protein (789aa)
Cadmium-exporting ATPase {ECO:0000313|EMBL:EFH13641.1}; EC=3.6.3.3 {ECO:0000313|EMBL:EFH13641.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
zntA; zinc, cadmium, cobalt and lead efflux system (EC:3.6.3.3 3.6.3.5)
Cadmium-exporting ATPase n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RGC7_9PROT
SCN18_30_10_14_R2_B_scaffold_394_14
SCNPILOT_EXPT_500_P_Plasmid_65_940, SCNPILOT_EXPT_500_P_Plasmid_65_940, SCNPILOT_EXPT_500_P_Plasmid_65_940, SCNPILOT_EXPT_500_P_Plasmid_65_940, SCNPILOT_EXPT_500_P_Plasmid_65_940, Plasmid-like

Not on your lists

19034..19717
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Calothrix sp. PCC 7103 RepID=UPI0003776F89
integral membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EJK81905.1}; Flags: Precursor;; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
SCN18_30_10_14_R2_B_scaffold_394_15
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19717..20193
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0CZB1_CAUCE
Uncharacterized protein {ECO:0000313|EMBL:ENZ81595.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
magnesium transporter MgtC
SCN18_30_10_14_R2_B_scaffold_394_16
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20196..20540
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F714_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV11938.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_394_17
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20623..21603
DNA (981bp) protein (327aa)
Cation diffusion facilitator family transporter n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YM84_9PROT
Cation efflux protein {ECO:0000313|EMBL:GAN81587.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
cation efflux system protein
SCN18_30_10_14_R2_B_scaffold_394_18
unknown

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21841..22236
DNA (396bp) protein (132aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_394_19
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22329..23762
DNA (1434bp) protein (478aa)
Outer membrane efflux protein n=1 Tax=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) RepID=Q3JB87_NITOC
Heavy metal RND efflux outer membrane protein CzcC family {ECO:0000313|EMBL:KIL99090.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
Outer membrane efflux protein
SCN18_30_10_14_R2_B_scaffold_394_20
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23759..24907
DNA (1149bp) protein (383aa)
Cobalt/zinc/cadmium efflux RND transporter membrane fusion protein CzcB family {ECO:0000313|EMBL:KIL99091.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
RND family efflux transporter, MFP subunit id=4041025 bin=GWC2_Proteo_65_14_Ab886 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
secretion protein HlyD
SCN18_30_10_14_R2_B_scaffold_394_21
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24925..28080
DNA (3156bp) protein (1052aa)
Heavy metal efflux pump, CzcA family n=1 Tax=gamma proteobacterium HdN1 RepID=E1VMD2_9GAMM
Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA {ECO:0000313|EMBL:KIL99092.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
Heavy metal efflux pump, CzcA family
SCN18_30_10_14_R2_B_scaffold_394_22
unknown

Not on your lists

28077..28460
DNA (384bp) protein (128aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_394_23
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28647..29360
DNA (714bp) protein (238aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS39348.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
SCN18_30_10_14_R2_B_scaffold_394_24
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29656..30141)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Ralstonia syzygii R24 RepID=G3A4Y7_9RALS
conserved membrane protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CCA89001.1}; TaxID=907261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia syzygii R24.;"
SCN18_30_10_14_R2_B_scaffold_394_25
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30138..30959)
DNA (822bp) protein (274aa)
Putative THIAMINE BIOSYNTHESIS LIPOPROTEIN APBE TRANSMEMBRANE n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SNT7_9BRAD
Putative THIAMINE BIOSYNTHESIS LIPOPROTEIN APBE TRANSMEMBRANE {ECO:0000313|EMBL:CCD95864.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
putative thiamine biosynthesis HESIS lipoprotein APBE transmenbrane
SCN18_30_10_14_R2_B_scaffold_394_26
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30943..31476)
DNA (534bp) protein (178aa)
Putative uncharacterized protein n=1 Tax=Azospirillum amazonense Y2 RepID=G1XVC9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EGY02777.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
putative signal peptide protein
SCN18_30_10_14_R2_B_scaffold_394_27
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31479..32420)
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003B5EC20
Uncharacterized protein {ECO:0000313|EMBL:KER36593.1}; TaxID=1450518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lucknowense F2.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_394_28
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

33275..34753
DNA (1479bp) protein (493aa)
Uncharacterized protein n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XJ59_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP56319.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
SCN18_30_10_14_R2_B_scaffold_394_29
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34762..35178
DNA (417bp) protein (139aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW96940.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
SCN18_30_10_14_R2_B_scaffold_394_30
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

35987..37216
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6BZ60_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EDL62355.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
hypothetical protein
Displaying items 1-30 of 240 in total

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