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SCN18_30_10_14_R2_B_scaffold_434

Search features with annotation key words

Displaying items 1-30 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_434_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1406)
DNA (1404bp) protein (468aa)
Mlr5479 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98BP7_RHILO
Uncharacterized protein {ECO:0000313|EMBL:CDX20226.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_434_2
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1513..2970)
DNA (1458bp) protein (486aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V084_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI53114.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_434_3
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2967..3776)
DNA (810bp) protein (270aa)
UPI0003CE9DA6 related cluster n=1 Tax=unknown RepID=UPI0003CE9DA6
Uncharacterized protein {ECO:0000313|EMBL:ESW77786.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_434_4
SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4260..6359
DNA (2100bp) protein (700aa)
Uncharacterized protein n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WL53_VEREI
Uncharacterized protein {ECO:0000313|EMBL:EYD77461.1}; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium mesophilum DSM 19309.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_434_5
unknown

Not on your lists

6489..6689
DNA (201bp) protein (67aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_434_6
CN-SCN_Phenylobacterium_14x, CN-SCN_Phenylobacterium_14x, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6664..9177
DNA (2514bp) protein (838aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QE25_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig159, whole genome shotgun sequence {ECO:0000313|EMBL:KIU52344.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_434_7
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9279..9923
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B9M4_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK59723.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCN18_30_10_14_R2_B_scaffold_434_8
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10100..10453
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B7W3_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK59724.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCN18_30_10_14_R2_B_scaffold_434_9
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10624..10848)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TMU9_TISMK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK54087.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCN18_30_10_14_R2_B_scaffold_434_10
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11156..11611
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EBD9_BRASB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ33483.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCN18_30_10_14_R2_B_scaffold_434_11
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

Not on your lists

comp(11661..12245)
DNA (585bp) protein (195aa)
Shikimate kinase n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VKJ2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ETR77645.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
shikimate kinase
SCN18_30_10_14_R2_B_scaffold_434_12
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12560..13273)
DNA (714bp) protein (238aa)
short-chain dehydrogenase/reductase SDR (EC:1.1.1.100)
Short-chain alcohol dehydrogenase n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QA95_9BRAD
Short-chain alcohol dehydrogenase {ECO:0000313|EMBL:EIG56701.1}; Flags: Precursor;; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
SCN18_30_10_14_R2_B_scaffold_434_13
Sphingopyxis sp. MC1_SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14495..14848
DNA (354bp) protein (118aa)
UPI0003CEA921 related cluster n=1 Tax=unknown RepID=UPI0003CEA921
ArsR family transcriptional regulator {ECO:0000313|EMBL:CDX33377.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
putative transcriptional regulator
SCN18_30_10_14_R2_B_scaffold_434_14
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14969..15469
DNA (501bp) protein (167aa)
Uncharacterized protein n=2 Tax=Leptospira interrogans RepID=M6HIW8_LEPIR
Uncharacterized protein {ECO:0000313|EMBL:EMY24543.1}; TaxID=1085541 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira interrogans serovar Australis str. 200703203.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_434_15
SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15599..16165
DNA (567bp) protein (189aa)
Bifunctional deaminase-reductase domain protein n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2IY62_PSEUL
bifunctional deaminase-reductase domain containing protein
Bifunctional deaminase-reductase domain protein {ECO:0000313|EMBL:BAK75619.1}; TaxID=748280 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania sp. (strain NH8B).;"
SCN18_30_10_14_R2_B_scaffold_434_16
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16374..17948
DNA (1575bp) protein (525aa)
Transcriptional regulator, LysR family n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B6Z2_PARDP
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABL71286.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus denitrificans (strain Pd 1222).;"
SCN18_30_10_14_R2_B_scaffold_434_17
unknown

Not on your lists

18407..18634
DNA (228bp) protein (76aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_434_18
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19167..19580)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E411C0
Polyhydroxyalkanoate depolymerase {ECO:0000313|EMBL:ERP90832.1}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia sp. C1B10.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_434_19
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19625..20110)
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00037CD539
Uncharacterized protein {ECO:0000313|EMBL:GAO04957.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. PSR-1.;"
activator of Hsp90 ATPase 1 family protein
SCN18_30_10_14_R2_B_scaffold_434_20
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20160..20495)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002EC17D2
Transcriptional regulator, ArsR family protein {ECO:0000313|EMBL:KFE66098.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
ArsR family transcriptional regulator
SCN18_30_10_14_R2_B_scaffold_434_21
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20708..21427)
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000374832B
SAM-dependent methyltransferase {ECO:0000313|EMBL:KGM31748.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
Putative methyltransferase
SCN18_30_10_14_R2_B_scaffold_434_22
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21577..21996
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VQ51_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ39043.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
SCN18_30_10_14_R2_B_scaffold_434_23
SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, Plasmid-like

Not on your lists

comp(22048..22281)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ETU8_BRASB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ39592.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCN18_30_10_14_R2_B_scaffold_434_24
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22284..23486)
DNA (1203bp) protein (401aa)
Putative conjugal transfer protein trbI n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ETU7_BRASB
conjugal transfer protein TrbI
Putative conjugal transfer protein trbI {ECO:0000313|EMBL:ABQ39591.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCN18_30_10_14_R2_B_scaffold_434_25
CN-SCN_Plasmids_251x, CN-SCN_Plasmids_251x, CN-SCN_Plasmids_251x, CN-SCN_Plasmids_251x, CN-SCN_Plasmids_251x, Mobile_element

Not on your lists

comp(23486..24460)
DNA (975bp) protein (325aa)
Putative conjugal transfer protein trbG n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ETU6_BRASB
conjugal transfer protein TrbG
Putative conjugal transfer protein trbG {ECO:0000313|EMBL:ABQ39590.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCN18_30_10_14_R2_B_scaffold_434_26
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24463..25143)
DNA (681bp) protein (227aa)
Putative conjugal transfer protein trbF n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ETU5_BRASB
conjugal transfer protein TrbF
Putative conjugal transfer protein trbF {ECO:0000313|EMBL:ABQ39589.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCN18_30_10_14_R2_B_scaffold_434_27
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25143..26291)
DNA (1149bp) protein (383aa)
Putative conjugal transfer protein trbL n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ETU4_BRASB
conjugal transfer protein TrbL
Putative conjugal transfer protein trbL {ECO:0000313|EMBL:ABQ39588.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCN18_30_10_14_R2_B_scaffold_434_28
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26471..26806)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ETU3_BRASB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ39587.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCN18_30_10_14_R2_B_scaffold_434_29
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26816..27580)
DNA (765bp) protein (255aa)
Putative conjugal transfer protein trbJ n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ETU2_BRASB
conjugal transfer protein TrbJ
Putative conjugal transfer protein trbJ {ECO:0000313|EMBL:ABQ39586.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCN18_30_10_14_R2_B_scaffold_434_30
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27577..30015)
DNA (2439bp) protein (813aa)
Conjugal transfer protein trbE n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ETU1_BRASB
Conjugal transfer protein trbE {ECO:0000313|EMBL:ABQ39585.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
trbE; conjugal transfer ATPase TrbE
Displaying items 1-30 of 85 in total

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