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SCN18_30_10_14_R2_B_scaffold_988

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_988_1
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..392
DNA (390bp) protein (130aa)
Flagellar hook protein FlgE n=1 Tax=Azospirillum amazonense Y2 RepID=G1XXT8_9PROT
Flagellar hook protein FlgE {ECO:0000313|EMBL:GAN78214.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
flgE; flagellar hook protein FlgE
SCN18_30_10_14_R2_B_scaffold_988_2
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

409..1932
DNA (1524bp) protein (508aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000364BADD
Flagellar hook-associated protein FlgK {ECO:0000313|EMBL:GAN78215.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
flgK; flagellar hook-associated protein
SCN18_30_10_14_R2_B_scaffold_988_3
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1943..3025
DNA (1083bp) protein (361aa)
Uncharacterized protein n=2 Tax=Acidiphilium RepID=F0J199_ACIMA
Flagellar hook-associated protein FlgL {ECO:0000313|EMBL:GAN78216.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_988_4
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3140..3985
DNA (846bp) protein (282aa)
flagellin n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B52EDF
Flagellin domain-containing protein {ECO:0000313|EMBL:GAN78217.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
flagellin
SCN18_30_10_14_R2_B_scaffold_988_5
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4099..4551
DNA (453bp) protein (151aa)
Flagellar protein FlbT (Fragment) n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RTC4_9PROT
flbT; putative flagellar FlbT
Flagellar biosynthesis regulator FlbT {ECO:0000313|EMBL:GAN78218.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCN18_30_10_14_R2_B_scaffold_988_6
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4539..4886
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RL87_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAN78219.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
flaF; flagellar protein flaF
SCN18_30_10_14_R2_B_scaffold_988_7
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4900..5751
DNA (852bp) protein (284aa)
Uncharacterized protein n=2 Tax=Acidiphilium RepID=F0J196_ACIMA
Uncharacterized protein {ECO:0000313|EMBL:GAN78220.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_988_8
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5792..7243
DNA (1452bp) protein (484aa)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B48D9C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIB13868.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
SCN18_30_10_14_R2_B_scaffold_988_9
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7240..9465
DNA (2226bp) protein (742aa)
Uncharacterized protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J194_ACIMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ79476.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
SCN18_30_10_14_R2_B_scaffold_988_10
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9941..11059)
DNA (1119bp) protein (373aa)
Putative uncharacterized protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BVB9_GRABC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABI61233.1}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
SCN18_30_10_14_R2_B_scaffold_988_11
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11163..11678)
DNA (516bp) protein (172aa)
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
Adenine phosphoribosyltransferase n=3 Tax=Acidiphilium RepID=APT_ACICJ
SCN18_30_10_14_R2_B_scaffold_988_12
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11777..11965
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00031366C3
Uncharacterized protein {ECO:0000313|EMBL:EFH11468.1}; Flags: Fragment;; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
SCN18_30_10_14_R2_B_scaffold_988_13
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12059..13393
DNA (1335bp) protein (445aa)
Sugar ABC transporter, substrate-binding component id=4903987 bin=GWC2_Methylomirabilis_70_16 species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
sugar ABC transporter, substrate-binding component
Tax=GWC2_Rokubacteria_70_16_curated
SCN18_30_10_14_R2_B_scaffold_988_14
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13415..15070)
DNA (1656bp) protein (552aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000375DCBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ90045.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
SCN18_30_10_14_R2_B_scaffold_988_15
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15168..16082
DNA (915bp) protein (305aa)
sn-glycerol 3-phosphate transport system permease protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NSC8_AZOS1
Glycerol-3-phosphate transporter permease {ECO:0000313|EMBL:KJR66585.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
ugpA; sn-glycerol 3-phosphate transport system permease
SCN18_30_10_14_R2_B_scaffold_988_16
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16290..16955
DNA (666bp) protein (222aa)
UPI0003D02C59 related cluster n=1 Tax=unknown RepID=UPI0003D02C59
Uncharacterized protein {ECO:0000313|EMBL:ESZ26922.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_988_17
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16942..18135
DNA (1194bp) protein (398aa)
UPI0003D00F65 related cluster n=1 Tax=unknown RepID=UPI0003D00F65
Uncharacterized protein {ECO:0000313|EMBL:ESZ26923.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
putative transcriptional regulator
SCN18_30_10_14_R2_B_scaffold_988_18
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18234..18935)
DNA (702bp) protein (234aa)
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family id=4047992 bin=GWA2_Methylomirabilis_73_35 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter-like protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
SCN18_30_10_14_R2_B_scaffold_988_19
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18919..19674)
DNA (756bp) protein (252aa)
ABC transporter family protein id=4048078 bin=GWA2_Methylomirabilis_73_35 species=Desulfosporosinus sp. OT genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
SCN18_30_10_14_R2_B_scaffold_988_20
CN-SCN_Lautropia_89x, CN-SCN_Lautropia_89x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19667..20665)
DNA (999bp) protein (333aa)
Branched-chain amino acid transport system / permease component family protein id=4048079 bin=GWA2_Methylomirabilis_73_35 species=Desulfosporosinus sp. OT genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
branched-chain amino acid ABC transporter permease
Tax=GWA2_Rokubacteria_73_35_curated
SCN18_30_10_14_R2_B_scaffold_988_21
SCNPILOT_EXPT_1000_BF_Afipia_62_8, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20662..21543)
DNA (882bp) protein (294aa)
Putative permease protein, branched-chain amino acid ABC-type transport system id=4851657 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
branched chain amino acid ABC transporter
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
SCN18_30_10_14_R2_B_scaffold_988_22
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21575..22774)
DNA (1200bp) protein (400aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family id=4851656 bin=GWC2_Methylomirabilis_70_24 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
amino acid/amide ABC transporter substrate-binding protein, HAAT family
Tax=GWA2_Rokubacteria_70_23_curated
SCN18_30_10_14_R2_B_scaffold_988_23
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22957..23790
DNA (834bp) protein (278aa)
sn-glycerol-3-phosphate ABC transporter permease protein n=2 Tax=Acidiphilium RepID=F0J6S5_ACIMA
ABC transporter sn-glycerol-3-phosphate permease {ECO:0000313|EMBL:GAN80570.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
ugpE; sn-glycerol-3-phosphate ABC transporter permease
SCN18_30_10_14_R2_B_scaffold_988_24
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23790..24917
DNA (1128bp) protein (376aa)
sn-glycerol-3-phosphate import ATP-binding protein UgpC {ECO:0000313|EMBL:KDM68445.1}; EC=3.6.3.20 {ECO:0000313|EMBL:KDM68445.1};; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein (EC:3.6.3.20)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037B2F79
SCN18_30_10_14_R2_B_scaffold_988_25
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25013..25318
DNA (306bp) protein (102aa)
SCN18_30_10_14_R2_B_scaffold_988_26
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25315..26709
DNA (1395bp) protein (465aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037B1552
Uncharacterized protein {ECO:0000313|EMBL:ETW94164.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
amidase
SCN18_30_10_14_R2_B_scaffold_988_trna_1
unknown

Not on your lists

comp(26728..26801)
DNA (74bp)
transferRNA Pro
SCN18_30_10_14_R2_B_scaffold_988_27
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26868..27551)
DNA (684bp) protein (228aa)
N-acylhomoserine lactone synthetase-related protein n=2 Tax=Geobacter metallireducens RepID=Q39U08_GEOMG
N-acylhomoserine lactone synthetase-related protein
N-acylhomoserine lactone synthetase-related protein {ECO:0000313|EMBL:ABB32266.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
SCN18_30_10_14_R2_B_scaffold_988_28
unknown

Not on your lists

comp(27981..28625)
DNA (645bp) protein (215aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_988_29
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28730..28969)
DNA (240bp) protein (80aa)
UBA/THIF-type NAD/FAD binding fold protein {ECO:0000313|EMBL:EWY41263.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
Displaying 30 items

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