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SCN18_30_10_14_R2_B_scaffold_1474

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_1474_1
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..295
DNA (294bp) protein (98aa)
Nucleoid-associated protein GbCGDNIH1_0260 n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Y260_GRABC
Putative transcriptional regulatory protein
Nucleoid-associated protein GbCGDNIH3_0260 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
SCN18_30_10_14_R2_B_scaffold_1474_2
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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424..1017
DNA (594bp) protein (198aa)
Recombination protein RecR n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=RECR_GRABC
Recombination protein recR
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
SCN18_30_10_14_R2_B_scaffold_1474_3
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1014..2582
DNA (1569bp) protein (523aa)
L-amino-acid oxidase (EC:1.4.3.2)
Amine oxidase, flavin-containing superfamily n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WLB7_9SYNE
Amine oxidase, flavin-containing superfamily {ECO:0000313|EMBL:EDX85966.1}; TaxID=91464 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. PCC 7335.;"
SCN18_30_10_14_R2_B_scaffold_1474_4
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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2643..3809
DNA (1167bp) protein (389aa)
Glucose-6-phosphate dehydrogenase n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=U5WQW9_MYCKA
Glucose-6-phosphate dehydrogenase {ECO:0000313|EMBL:ETW21436.1}; TaxID=1436723 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium gastri 'Wayne'.;"
glucose-6-phosphate dehydrogenase
SCN18_30_10_14_R2_B_scaffold_1474_5
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3862..5055)
DNA (1194bp) protein (398aa)
ABC-type branched-chain amino acid transport system n=1 Tax=uncultured proteobacterium RepID=R4MXL2_9PROT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
SCN18_30_10_14_R2_B_scaffold_1474_6
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5136..6092)
DNA (957bp) protein (319aa)
Rubrerythrin n=3 Tax=Acidiphilium RepID=A5FV55_ACICJ
Rubrerythrin {ECO:0000313|EMBL:GAN76707.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1474_7
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6264..7370)
DNA (1107bp) protein (369aa)
luciferase-like monooxygenase (EC:1.14.-.-)
Putative Luciferase-like monooxygenase n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ETB4_BRASB
Alkane 1-monooxygenase {ECO:0000313|EMBL:ETR75474.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
SCN18_30_10_14_R2_B_scaffold_1474_8
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7485..9059)
DNA (1575bp) protein (525aa)
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:3.5.4.10)
IMP cyclohydrolase n=1 Tax=Roseomonas sp. B5 RepID=UPI0003043F54
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
SCN18_30_10_14_R2_B_scaffold_1474_9
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9097..10200)
DNA (1104bp) protein (368aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EFH12114.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFH12114.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
Alpha-L-glycero-D-manno-heptose alpha-1,3-glucosyltransferase (EC:2.4.1.-)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002D8A4AF
SCN18_30_10_14_R2_B_scaffold_1474_10
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10233..11822)
DNA (1590bp) protein (530aa)
Heparinase II/III family protein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FUH0_ACICJ
heparinase II/III family protein
Heparinase II/III family protein {ECO:0000313|EMBL:ABQ29252.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
SCN18_30_10_14_R2_B_scaffold_1474_11
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11822..12496)
DNA (675bp) protein (225aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RKQ2_9PROT
SCN18_30_10_14_R2_B_scaffold_1474_12
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12556..13806)
DNA (1251bp) protein (417aa)
RNA methyltransferase (EC:2.1.1.-)
RNA methyltransferase {ECO:0000313|EMBL:BAJ82327.1}; EC=2.1.1.- {ECO:0000313|EMBL:BAJ82327.1};; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
RNA methyltransferase n=2 Tax=Acidiphilium RepID=F0J4Y0_ACIMA
SCN18_30_10_14_R2_B_scaffold_1474_13
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13850..15232)
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GX70_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ERF82117.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
major facilitator superfamily MFS_1
SCN18_30_10_14_R2_B_scaffold_1474_14
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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15355..17088
DNA (1734bp) protein (578aa)
undecaprenyl-phosphate-4-amino-L-arabinose--lipid A 4-amino-L-arabinosyltransferase (EC:2.4.2.-)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036172C3
Dolichyl-phosphate-mannose-protein mannosyltransferase {ECO:0000313|EMBL:EHL95312.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
SCN18_30_10_14_R2_B_scaffold_1474_15
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(17089..17442)
DNA (354bp) protein (118aa)
Putative uncharacterized protein n=1 Tax=Acidiphilium sp. PM RepID=F7S793_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGO94989.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
SCN18_30_10_14_R2_B_scaffold_1474_16
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17449..17661)
DNA (213bp) protein (71aa)
UPF0434 protein TH2_01130 n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LJB8_9PROT
UPF0434 protein TH2_01130 {ECO:0000256|HAMAP-Rule:MF_01187}; TaxID=1177928 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira profundimaris WP0211.;"
Trm112p-like protein
SCN18_30_10_14_R2_B_scaffold_1474_17
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17700..18365)
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037850EE
Peptidase S16 family protein {ECO:0000313|EMBL:EKM99273.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
peptidase S16, lon domain-containing protein
SCN18_30_10_14_R2_B_scaffold_1474_18
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18365..19303)
DNA (939bp) protein (313aa)
thioredoxin n=1 Tax=Roseomonas sp. B5 RepID=UPI0002E73FA6
Thioredoxin {ECO:0000313|EMBL:GAN77867.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
putative thioredoxin
SCN18_30_10_14_R2_B_scaffold_1474_trna_1
unknown

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19500..19571
DNA (72bp)
transferRNA Gly
Displaying 19 items

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