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SCN18_30_10_14_R2_B_scaffold_1819

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_1819_1
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1497)
DNA (1497bp) protein (499aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
carB; carbamoyl-phosphate synthase large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase large chain n=1 Tax=Acidiphilium sp. PM RepID=F7S4W7_9PROT
SCN18_30_10_14_R2_B_scaffold_1819_2
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1619..1894)
DNA (276bp) protein (92aa)
Putative plasmid stabilization system protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AKX5_AZOBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIB11990.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
SCN18_30_10_14_R2_B_scaffold_1819_3
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2138..2755)
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=gamma proteobacterium SCGC AB-629-K02 RepID=UPI000373EFC9
Uncharacterized protein {ECO:0000313|EMBL:ETW92912.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
thiamine pyrophosphate enzyme-like protein
SCN18_30_10_14_R2_B_scaffold_1819_4
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2766..3296)
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=gamma proteobacterium SCGC AB-629-K02 RepID=UPI00037D52F6
Sulfopyruvate decarboxylase {ECO:0000313|EMBL:ETW98191.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Sulfopyruvate decarboxylase subunit alpha
SCN18_30_10_14_R2_B_scaffold_1819_5
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3344..4549)
DNA (1206bp) protein (402aa)
UreA/short-chain binding protein of ABC transporter n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IHU4_METNO
UreA/short-chain binding protein of ABC transporter
LivK protein {ECO:0000313|EMBL:BAQ48346.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
SCN18_30_10_14_R2_B_scaffold_1819_6
unknown

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comp(4635..4859)
DNA (225bp) protein (75aa)
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1819_7
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4937..5494)
DNA (558bp) protein (186aa)
Acetyltransferase (EC:2.3.1.-)
Acetyltransferase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BPS1_GRABC
Acetyl transferase {ECO:0000313|EMBL:GAN78414.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCN18_30_10_14_R2_B_scaffold_1819_8
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5529..7478)
DNA (1950bp) protein (650aa)
RNA polymerase sigma factor RpoD n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BPS0_GRABC
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
RNA polymerase sigma factor rpoD
SCN18_30_10_14_R2_B_scaffold_1819_9
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7572..9374)
DNA (1803bp) protein (601aa)
DNA primase (EC:2.7.7.-)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051044}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051045};; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
DNA primase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BPR9_GRABC
SCN18_30_10_14_R2_B_scaffold_1819_10
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9374..9832)
DNA (459bp) protein (153aa)
aspartyl-tRNA amidotransferase subunit B n=1 Tax=Roseomonas sp. B5 RepID=UPI00030E97EA
YqeY-like protein {ECO:0000313|EMBL:EHM02282.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
GatB/Yqey domain protein
SCN18_30_10_14_R2_B_scaffold_1819_11
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9952..11328
DNA (1377bp) protein (459aa)
Carbamoyl-phosphate synthase small chain (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
Carbamoyl-phosphate synthase small chain n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RIN4_9PROT
SCN18_30_10_14_R2_B_scaffold_1819_12
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11321..11590
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5XNH0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKM98234.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
SCN18_30_10_14_R2_B_scaffold_1819_13
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11596..12804
DNA (1209bp) protein (403aa)
Wenxma_14, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ68290.1}; EC=1.14.13.1 {ECO:0000313|EMBL:KIQ68290.1};; TaxID=1123501 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Wenxinia.;" source="Wenxinia marina DSM 24838.;"
hypothetical protein n=1 Tax=Wenxinia marina RepID=UPI000380A3D0
monooxygenase
SCN18_30_10_14_R2_B_scaffold_1819_14
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12819..13265)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AMD5_AZOBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCC98397.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
SCN18_30_10_14_R2_B_scaffold_1819_15
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13299..13919)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A846_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAN77190.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1819_16
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14001..15227
DNA (1227bp) protein (409aa)
III protein, CoA-transferase family n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZV15_9PROT
formyl-CoA transferase
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
SCN18_30_10_14_R2_B_scaffold_1819_17
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15227..16039
DNA (813bp) protein (271aa)
enoyl-CoA hydratase (EC:4.2.1.17)
enoyl-CoA hydratase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002DA10AC
Tax=CG_Syntroph_01
SCN18_30_10_14_R2_B_scaffold_1819_18
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16465..17445
DNA (981bp) protein (327aa)
Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YBS2_9BURK
Amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:EYS83067.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-4.;"
extracellular ligand-binding receptor
SCN18_30_10_14_R2_B_scaffold_1819_19
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17435..18781)
DNA (1347bp) protein (449aa)
NADH dehydrogenase n=1 Tax=alpha proteobacterium JLT2015 RepID=M2TAH0_9PROT
NADH dehydrogenase {ECO:0000313|EMBL:EMD83589.1}; TaxID=1234595 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium JLT2015.;"
Putative NADH dehydrogenase transmembrane protein
SCN18_30_10_14_R2_B_scaffold_1819_20
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18846..19784)
DNA (939bp) protein (313aa)
ferredoxin n=1 Tax=Cupriavidus sp. UYPR2.512 RepID=UPI00036E5232
ferredoxin
Ferredoxin {ECO:0000313|EMBL:AKC72228.1}; TaxID=573737 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea oxalativorans.;"
SCN18_30_10_14_R2_B_scaffold_1819_21
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19784..20671)
DNA (888bp) protein (296aa)
citrate (pro-3S)-lyase (EC:4.1.3.6)
citryl-CoA lyase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B36501
Host specificity protein {ECO:0000313|EMBL:ETR76108.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
SCN18_30_10_14_R2_B_scaffold_1819_22
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20674..21894)
DNA (1221bp) protein (407aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M1C6_METRJ
L-carnitine dehydratase/bile acid-inducible protein F
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
SCN18_30_10_14_R2_B_scaffold_1819_23
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22259..24229
DNA (1971bp) protein (657aa)
TonB-dependent receptor, plug n=1 Tax=Acidiphilium sp. PM RepID=F7S1Y0_9PROT
TonB-dependent receptor, plug
TonB-dependent receptor, plug {ECO:0000313|EMBL:EGO96847.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
SCN18_30_10_14_R2_B_scaffold_1819_24
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24232..24786)
DNA (555bp) protein (185aa)
ATP:cob(I)alamin adenosyltransferase n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A849_9PROT
ATP:cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:EHL96052.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
meaD; ATP:cob(I)alamin adenosyltransferase involved in cofactor biosynthesis for adenosylcobalamin-dependent methylmalonyl-CoA mutase
SCN18_30_10_14_R2_B_scaffold_1819_25
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24795..25520)
DNA (726bp) protein (242aa)
TonB-like n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NTM9_9DELT
TonB protein
TonB-like {ECO:0000313|EMBL:EAT05048.1}; TaxID=262489 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium MLMS-1.;"
Displaying 25 items

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