ggKbase home page

SCN18_30_10_14_R2_B_scaffold_1444

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_1444_1
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(227..736)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IPG1_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS69907.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCN18_30_10_14_R2_B_scaffold_1444_2
SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1121..1678
DNA (558bp) protein (186aa)
Putative manganese efflux pump MntP n=1 Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=MNTP_BURPP
hypothetical protein
Putative manganese efflux pump MntP {ECO:0000255|HAMAP-Rule:MF_01521}; TaxID=398527 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phytofirmans (strain DSM 17436 / PsJN).;"
SCN18_30_10_14_R2_B_scaffold_1444_3
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1702..2025)
DNA (324bp) protein (108aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium Bio2 RepID=B2BK98_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:ABU51087.1}; TaxID=460936 species="Bacteria; environmental samples.;" source="uncultured bacterium Bio2.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1444_4
SCN_Thiomonas_15x, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2044..2898)
DNA (855bp) protein (285aa)
Putative lipoprotein n=1 Tax=Ralstonia solanacearum SD54 RepID=V5CGS4_RALSL
putative lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:CBJ39040.1}; TaxID=859655 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum CMR15.;"
SCN18_30_10_14_R2_B_scaffold_1444_5
unknown

Not on your lists

2996..3481
DNA (486bp) protein (162aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1444_6
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3481..3924
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PSR8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41403.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
putative insertion element protein
SCN18_30_10_14_R2_B_scaffold_1444_7
SCNPILOT_CONT_500_P_Xanthomonadales_69_150, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3878..5068)
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000312D976
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AGG87273.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCN18_30_10_14_R2_B_scaffold_1444_8
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5372..7501)
DNA (2130bp) protein (710aa)
TonB-dependent siderophore receptor n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W641_ACISJ
TonB-dependent receptor {ECO:0000313|EMBL:KGM53141.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
TonB-dependent siderophore receptor
SCN18_30_10_14_R2_B_scaffold_1444_9
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7816..8364)
DNA (549bp) protein (183aa)
Putative insertion element protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EUG6_BRASB
putative insertion element protein
Putative insertion element protein {ECO:0000313|EMBL:ABQ39810.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCN18_30_10_14_R2_B_scaffold_1444_10
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8758..9519)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SD28_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB48387.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
SCN18_30_10_14_R2_B_scaffold_1444_11
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10099..10617
DNA (519bp) protein (173aa)
TonB-dependent receptor n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IDA2_BEII9
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ACB93959.1}; Flags: Precursor;; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCN18_30_10_14_R2_B_scaffold_1444_12
unknown

Not on your lists

10954..11568
DNA (615bp) protein (205aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1444_13
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11646..12848
DNA (1203bp) protein (401aa)
Prophage LambdaMc01, DNA methyltransferase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X2B3_9BRAD
Prophage LambdaMc01, DNA methyltransferase {ECO:0000313|EMBL:EAQ33626.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
adenine methyltransferase
SCN18_30_10_14_R2_B_scaffold_1444_14
Sphingopyxis sp. MC1_SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12939..13415
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Methylocystis rosea RepID=UPI00037DF866
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL01311.1}; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903; / NBRC 16000 / CB 81) (Caulobacter subvibrioides).;"
SCN18_30_10_14_R2_B_scaffold_1444_15
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13412..14884
DNA (1473bp) protein (491aa)
hypothetical protein n=1 Tax=Methylotenera sp. 1P/1 RepID=UPI00036FD8B3
phage protein
Tax=GWA2_Polynucleobacter_45_21_curated
SCN18_30_10_14_R2_B_scaffold_1444_16
Paracoccus sphaerophysae, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14881..15315)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JEN2_HYPSM
Uncharacterized protein {ECO:0000313|EMBL:KGJ09745.1}; TaxID=690417 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sphaerophysae.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1444_17
Methylomicrobium album, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15324..15824)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WDF5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EIC30332.1}; TaxID=686340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium album BG8.;"
SCN18_30_10_14_R2_B_scaffold_1444_18
unknown

Not on your lists

comp(15953..16144)
DNA (192bp) protein (64aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1444_19
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

Not on your lists

comp(16241..16972)
DNA (732bp) protein (244aa)
Methyltransferase type 11 n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UGJ2_METS4
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ACA20984.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCN18_30_10_14_R2_B_scaffold_1444_20
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17596..20544)
DNA (2949bp) protein (983aa)
DNA/RNA helicase, superfamily II n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=I9NJV9_RHILT
DNA/RNA helicase, superfamily II {ECO:0000313|EMBL:EJB08249.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1444_21
unknown

Not on your lists

20756..20899
DNA (144bp) protein (48aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1444_22
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20892..21725
DNA (834bp) protein (278aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UFJ7_CELFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG72956.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCN18_30_10_14_R2_B_scaffold_1444_23
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21722..22303
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IHK6_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS67499.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCN18_30_10_14_R2_B_scaffold_1444_24
SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22287..22934)
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI0003728BEC
Sphingomonas taxi strain 30a NODE_7, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26007.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCN18_30_10_14_R2_B_scaffold_1444_25
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22915..23763)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RSF6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD84883.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1444_26
unknown

Not on your lists

comp(23936..24241)
DNA (306bp) protein (102aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1444_27
SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, SCNpilot_BF_INOC_Solirubrobacterales_68_7, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24288..24893
DNA (606bp) protein (202aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UFJ9_CELFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG72958.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCN18_30_10_14_R2_B_scaffold_1444_28
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25094..25327
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI00035DF2B3
Uncharacterized protein {ECO:0000313|EMBL:CCV15561.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
conserved hypothethical protein
SCN18_30_10_14_R2_B_scaffold_1444_29
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25331..25795
DNA (465bp) protein (155aa)
Putative bacteriophage-related protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QRL7_9BRAD
Putative bacteriophage-related protein {ECO:0000313|EMBL:EGP06228.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
bacteriophage-like protein
SCN18_30_10_14_R2_B_scaffold_1444_30
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25792..27420
DNA (1629bp) protein (543aa)
Resolvase n=2 Tax=Bradyrhizobiaceae RepID=F7QRL8_9BRAD
Resolvase {ECO:0000313|EMBL:EGP06229.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
resolvase
Displaying items 1-30 of 57 in total

View Taxonomy