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SCN18_26_2_15_R2_B_scaffold_1425

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R2_B_scaffold_1425_1
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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491..2143
DNA (1653bp) protein (551aa)
Thiamine pyrophosphate protein id=4148695 bin=GWC2_Syntrophobacterales_56_13 species=Bacillus bataviensis genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
thiamine pyrophosphate protein central region
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
SCN18_26_2_15_R2_B_scaffold_1425_2
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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2220..3359
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZIC6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIT71462.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
hypothetical protein
SCN18_26_2_15_R2_B_scaffold_1425_3
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3372..4679)
DNA (1308bp) protein (436aa)
MFS transporter n=1 Tax=Burkholderia bryophila RepID=UPI00037398B6
MFS transporter {ECO:0000313|EMBL:KDR35677.1}; TaxID=1071679 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia grimmiae.;"
major facilitator transporter
SCN18_26_2_15_R2_B_scaffold_1425_4
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4993..7374
DNA (2382bp) protein (794aa)
Probable phosphoketolase {ECO:0000256|HAMAP-Rule:MF_01403}; EC=4.1.2.- {ECO:0000256|HAMAP-Rule:MF_01403};; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
phosphoketolase (EC:4.1.2.9)
phosphoketolase n=1 Tax=Methyloferula stellata RepID=UPI00037359EF
SCN18_26_2_15_R2_B_scaffold_1425_5
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7405..8367)
DNA (963bp) protein (321aa)
peptide ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003621355
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETR76110.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
peptide ABC transporter ATP-binding protein
SCN18_26_2_15_R2_B_scaffold_1425_6
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8370..9350)
DNA (981bp) protein (327aa)
Peptide ABC transporter ATP-binding protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89VQ5_BRADU
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:ETR76111.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
peptide ABC transporter ATP-binding protein
SCN18_26_2_15_R2_B_scaffold_1425_7
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9350..10225)
DNA (876bp) protein (292aa)
diguanylate cyclase n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003601BD8
Peptide ABC transporter permease protein {ECO:0000313|EMBL:AHY55326.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
peptide ABC transporter permease
SCN18_26_2_15_R2_B_scaffold_1425_8
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10222..11169)
DNA (948bp) protein (316aa)
Peptide ABC transporter permease protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89VQ3_BRADU
Peptide ABC transporter permease {ECO:0000313|EMBL:ETR76113.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
peptide ABC transporter permease
SCN18_26_2_15_R2_B_scaffold_1425_9
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11177..12877)
DNA (1701bp) protein (567aa)
peptide ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036B634D
peptide ABC transporter substrate-binding protein
ABC transporter peptide-binding protein {ECO:0000313|EMBL:BAL79990.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
SCN18_26_2_15_R2_B_scaffold_1425_10
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12911..13534)
DNA (624bp) protein (208aa)
urease accessory protein UreG n=1 Tax=Gluconacetobacter europaeus RepID=UPI000237D980
Urease accessory protein UreG {ECO:0000256|HAMAP-Rule:MF_01389}; TaxID=1231341 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter orientalis 21F-2.;"
ureG; urease accessory protein
SCN18_26_2_15_R2_B_scaffold_1425_11
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13531..14328)
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003776885
Urease accessory protein UreF {ECO:0000256|HAMAP-Rule:MF_01385}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
urease accessory protein UreF
SCN18_26_2_15_R2_B_scaffold_1425_12
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14282..14752)
DNA (471bp) protein (157aa)
Urease accessory protein UreE n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NYU5_9BRAD
Urease accessory protein UreE {ECO:0000256|HAMAP-Rule:MF_00822, ECO:0000256|SAAS:SAAS00072411}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
UreE urease accessory domain-containing protein
SCN18_26_2_15_R2_B_scaffold_1425_13
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14752..16461)
DNA (1710bp) protein (570aa)
Urease subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_01953, ECO:0000256|SAAS:SAAS00033844};; Urea amidohydrolase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
Urease subunit alpha n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YND9_9PROT
urease alpha subunit
SCN18_26_2_15_R2_B_scaffold_1425_14
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16462..16767)
DNA (306bp) protein (102aa)
Urease subunit beta {ECO:0000256|HAMAP-Rule:MF_01954}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_01954};; Urea amidohydrolase subunit beta {ECO:0000256|HAMAP-Rule:MF_01954}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
ureB; urease subunit beta (EC:3.5.1.5)
Putative urease alpha subunit n=1 Tax=alpha proteobacterium BAL199 RepID=A8TMF6_9PROT
SCN18_26_2_15_R2_B_scaffold_1425_15
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16778..17080)
DNA (303bp) protein (101aa)
Urease subunit gamma {ECO:0000256|HAMAP-Rule:MF_00739, ECO:0000256|RuleBase:RU003850}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_00739, ECO:0000256|RuleBase:RU003850};; Urea amidohydrolase subunit gamma {ECO:0000256|HAMAP-Rule:MF_00739}; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia alexandrii (strain DSM 17067 / NCIMB 14079 / DFL-11); (Stappia alexandrii).;"
Urease subunit gamma n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QWV3_9RHOB
ureA; urease subunit gamma
SCN18_26_2_15_R2_B_scaffold_1425_16
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17114..18058)
DNA (945bp) protein (315aa)
Urease accessory protein UreD n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QWV2_9RHOB
Urease accessory protein UreD {ECO:0000256|HAMAP-Rule:MF_01384}; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia alexandrii (strain DSM 17067 / NCIMB 14079 / DFL-11); (Stappia alexandrii).;"
ureD; urease accessory protein
SCN18_26_2_15_R2_B_scaffold_1425_17
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18033..18728)
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI00031ADB16
ABC transporter urea/short-chain amide/branched-chain amino acid transport {ECO:0000313|EMBL:GAN77499.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
Short-chain amide or branched-chain amino acid ABC transporter; ATP-binding component
Displaying 17 items

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