name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCN18_26_2_15_R2_B_scaffold_488_1
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(390..1838)
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hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037EA0BE
dihydropyrimidinase
Dihydropyrimidinase {ECO:0000313|EMBL:ACA16983.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
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SCN18_26_2_15_R2_B_scaffold_488_2
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
2255..2638
|
hydrogenase nickel incorporation protein HypB n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00035DAFFE
hydrogenase nickel incorporation protein HypB
Tax=BJP_IG2102_Gammaproteobacteria_62_140
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SCN18_26_2_15_R2_B_scaffold_488_3
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2737..5013)
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NiFe hydrogenase maturation protein HypF n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y4U5_9PROT
NiFe hydrogenase maturation protein HypF {ECO:0000313|EMBL:EGX99448.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
(NiFe) hydrogenase maturation protein HypF
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SCN18_26_2_15_R2_B_scaffold_488_4
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5010..6488)
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Nickel-dependent hydrogenase, large subunit n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y4U6_9PROT
Nickel-dependent hydrogenase, large subunit {ECO:0000313|EMBL:EGX99449.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
nickel-dependent hydrogenase large subunit
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SCN18_26_2_15_R2_B_scaffold_488_5
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6556..7557)
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Uptake hydrogenase accessory protein hupU n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P1M2_9RHOB
Uptake hydrogenase accessory protein hupU {ECO:0000313|EMBL:EAV40948.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata (strain ATCC 25650 / DSM 13394 / JCM 20685 / NBRC; 16684 / NCIMB 2208 / IAM 12614) (Stappia aggregata).;"
hypothetical protein
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SCN18_26_2_15_R2_B_scaffold_488_6
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7550..8941)
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Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata (strain ATCC 25650 / DSM 13394 / JCM 20685 / NBRC; 16684 / NCIMB 2208 / IAM 12614) (Stappia aggregata).;"
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P1M3_9RHOB
PAS/PAC sensor signal transduction histidine kinase
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SCN18_26_2_15_R2_B_scaffold_488_7
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8938..10416)
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Helix-turn-helix, Fis-type protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z413_9SPHN
Helix-turn-helix, Fis-type protein {ECO:0000313|EMBL:EGD60625.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
two component sigma-54 specific Fis family transcriptional regulator
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SCN18_26_2_15_R2_B_scaffold_488_8
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10421..11443)
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Hydrogenase expression/formation protein HypE n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y4V0_9PROT
Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:EGX99453.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
hydrogenase expression/formation protein HypE
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SCN18_26_2_15_R2_B_scaffold_488_9
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11440..12594)
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Hydrogenase expression/formation protein n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y4V1_9PROT
Hydrogenase expression/formation protein {ECO:0000313|EMBL:EGX99454.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
hydrogenase expression/formation protein HypD
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SCN18_26_2_15_R2_B_scaffold_488_10
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12591..12836)
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Hydrogenase expression/formation protein (HUPF/HYPC) n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P442_9RHOB
Hydrogenase expression/formation protein (HUPF/HYPC) {ECO:0000313|EMBL:EAV40216.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata (strain ATCC 25650 / DSM 13394 / JCM 20685 / NBRC; 16684 / NCIMB 2208 / IAM 12614) (Stappia aggregata).;"
hydrogenase expression/formation protein (HUPF/HYPC)
|
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SCN18_26_2_15_R2_B_scaffold_488_11
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12841..13530)
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Hydrogenase accessory protein HypB n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y4V3_9PROT
Hydrogenase accessory protein HypB {ECO:0000313|EMBL:EGX99456.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
hydrogenase accessory protein HypB
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SCN18_26_2_15_R2_B_scaffold_488_12
unknown
|
Not on your lists |
13579..13887
|
This feature has no annotations |
|
SCN18_26_2_15_R2_B_scaffold_488_13
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13800..14141)
|
Probable hydrogenase nickel incorporation protein HypA n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z419_9SPHN
Probable hydrogenase nickel incorporation protein HypA {ECO:0000256|HAMAP-Rule:MF_00213}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
hydrogenase nickel incorporation protein HypA
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SCN18_26_2_15_R2_B_scaffold_488_14
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14141..14974)
|
UPI0003CEAB57 related cluster n=1 Tax=unknown RepID=UPI0003CEAB57
Uncharacterized protein {ECO:0000313|EMBL:ESW79700.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hupK; HupK
|
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SCN18_26_2_15_R2_B_scaffold_488_15
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14971..15591)
|
Hydrogenase expression/formation protein n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y4V6_9PROT
Hydrogenase expression/formation protein {ECO:0000313|EMBL:EGX99459.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
hupJ; hydrogenase expression/formation protein
|
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SCN18_26_2_15_R2_B_scaffold_488_16
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15588..15806)
|
Rubredoxin n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P1N3_9RHOB
Rubredoxin {ECO:0000256|RuleBase:RU003820}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata (strain ATCC 25650 / DSM 13394 / JCM 20685 / NBRC; 16684 / NCIMB 2208 / IAM 12614) (Stappia aggregata).;"
rubredoxin-type Fe(Cys)4 protein
|
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SCN18_26_2_15_R2_B_scaffold_488_17
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15803..16648)
|
HupH hydrogenase expression/formation protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z423_9SPHN
HupH hydrogenase expression/formation protein {ECO:0000313|EMBL:EGD60635.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
HupH hydrogenase expression protein
|
|
SCN18_26_2_15_R2_B_scaffold_488_18
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16662..17111)
|
Hydrogenase expression/formation protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z424_9SPHN
HupG protein {ECO:0000313|EMBL:EGD60636.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
hydrogenase-1 expression HyaE
|
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SCN18_26_2_15_R2_B_scaffold_488_19
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17108..17425)
|
Hydrogenase expression/formation protein hupF n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y4W0_9PROT
Hydrogenase expression/formation protein hupF {ECO:0000313|EMBL:EGX99463.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
hupF; putative hydrogenase expression/formation protein hupF
|
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SCN18_26_2_15_R2_B_scaffold_488_20
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17425..18156)
|
Hydrogenase expression/formation protein hupD n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y4W1_9PROT
Hydrogenase expression/formation protein hupD {ECO:0000313|EMBL:EGX99464.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
hydrogenase expression/formation protein
|
|
SCN18_26_2_15_R2_B_scaffold_488_21
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18253..19515)
|
membrane protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B2E9E8
Uncharacterized membrane-anchored protein {ECO:0000313|EMBL:EGD60620.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
uncharacterized membrane-anchored protein
|
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SCN18_26_2_15_R2_B_scaffold_488_22
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20037..21119
|
hydrogenase (acceptor) (EC:1.12.99.6)
Hydrogenase protein small subunit n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P1P1_9RHOB
Hydrogenase protein small subunit {ECO:0000313|EMBL:EAV40967.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata (strain ATCC 25650 / DSM 13394 / JCM 20685 / NBRC; 16684 / NCIMB 2208 / IAM 12614) (Stappia aggregata).;"
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SCN18_26_2_15_R2_B_scaffold_488_23
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21116..22915
|
Hydrogenase protein large subunit n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y4W4_9PROT
Hydrogenase protein large subunit {ECO:0000313|EMBL:EGX99467.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
hydrogenase large subunit
|
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SCN18_26_2_15_R2_B_scaffold_488_24
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22991..23704
|
Ni/Fe-hydrogenase 1 B-type cytochrome subunit n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y4W2_9PROT
Ni/Fe-hydrogenase 1 B-type cytochrome subunit {ECO:0000313|EMBL:EGX99465.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
Ni/Fe-hydrogenase, b-type cytochrome subunit
|
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SCN18_26_2_15_R2_B_scaffold_488_25
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23853..24296)
|
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI0003802B81
hydrogenase maturation protease
Hydrogenase maturation protease {ECO:0000313|EMBL:CCJ06295.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
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SCN18_26_2_15_R2_B_scaffold_488_26
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24289..25593)
|
nickel-dependent hydrogenase large subunit n=1 Tax=Methylocystis rosea RepID=UPI000365E0A1
Nickel-dependent hydrogenase large subunit
Nickel-dependent hydrogenase large subunit {ECO:0000313|EMBL:CCJ06296.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
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SCN18_26_2_15_R2_B_scaffold_488_27
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25583..26365)
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oxidoreductase n=1 Tax=Methylocystis parvus RepID=UPI00035F6470
Oxidoreductase {ECO:0000313|EMBL:KGM10021.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
NADH ubiquinone oxidoreductase 20 kDa subunit
|
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SCN18_26_2_15_R2_B_scaffold_488_28
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26370..27221)
|
Oxidoreductase FAD/NAD(P)-binding protein n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HQS0_9PROT
Oxidoreductase FAD/NAD(P)-binding protein {ECO:0000313|EMBL:EKV30776.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
putative dihydroorotate dehydrogenase(electron transfer subunit)
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SCN18_26_2_15_R2_B_scaffold_488_29
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27225..27719)
|
Cyclic nucleotide-binding protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TMW3_9BRAD
conserved protein of unknown function[Include cyclic nucleotide-binding domain]
Uncharacterized protein {ECO:0000313|EMBL:CCQ74982.1}; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
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SCN18_26_2_15_R2_B_scaffold_488_30
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27742..29001)
|
Cytochrome c3 hydrogenase alpha (Or beta) chain n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BQ21_9GAMM
Cytochrome c3 hydrogenase alpha (Or beta) chain {ECO:0000313|EMBL:EAR22176.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
4Fe-4S ferredoxin
|