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SCN18_25_8_15_R2_B_scaffold_3447

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_3447_1
CN-SCN_Microbacterium_200x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(2..253)
DNA (252bp) protein (84aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000365D090
dihydropteroate synthase
SCN18_25_8_15_R2_B_scaffold_3447_2
SCNpilot_P_inoc_Microbacterium_67_17, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(265..855)
DNA (591bp) protein (197aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
GTP cyclohydrolase n=1 Tax=Microbacterium RepID=UPI00036F7AA4
folE; GTP cyclohydrolase I
SCN18_25_8_15_R2_B_scaffold_3447_3
SCNpilot_P_inoc_Microbacterium_67_17, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(865..2865)
DNA (2001bp) protein (667aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
cell division protein FtsH n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037DDE6B
ftsH; ATP-dependent Zn protease
SCN18_25_8_15_R2_B_scaffold_3447_4
Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3037..3588)
DNA (552bp) protein (184aa)
hypoxanthine phosphoribosyltransferase n=1 Tax=Microbacterium yannicii RepID=UPI000308DDFD
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:KHK96546.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypoxanthine-guanine phosphoribosyltransferase
SCN18_25_8_15_R2_B_scaffold_3447_5
Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3605..4594)
DNA (990bp) protein (330aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002D26BBD
ATPase PP-loop
SCN18_25_8_15_R2_B_scaffold_3447_6
Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4787..5278
DNA (492bp) protein (164aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
inorganic pyrophosphatase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003490C1C
ppa; inorganic pyrophosphatase
SCN18_25_8_15_R2_B_scaffold_3447_7
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(5352..6725)
DNA (1374bp) protein (458aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00035F127E
Peptidase M23 {ECO:0000313|EMBL:KHK96542.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_3447_trna_1
unknown

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6981..7053
DNA (73bp)
transferRNA Glu
SCN18_25_8_15_R2_B_scaffold_3447_trna_2
unknown

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7081..7154
DNA (74bp)
transferRNA Asp
SCN18_25_8_15_R2_B_scaffold_3447_trna_3
unknown

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7238..7310
DNA (73bp)
transferRNA Phe
SCN18_25_8_15_R2_B_scaffold_3447_8
CN-SCN_Leifsonia_139x, CN-SCN_Leifsonia_139x, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(7547..8227)
DNA (681bp) protein (227aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W103_9ACTO
Dehydrogenase {ECO:0000313|EMBL:KHK96443.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
short-chain dehydrogenase/reductase SDR
SCN18_25_8_15_R2_B_scaffold_3447_9
SCNpilot_P_inoc_Microbacterium_67_17, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(8237..8698)
DNA (462bp) protein (154aa)
Putative nudix hydrolase n=1 Tax=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) RepID=B0RHY1_CLAMS
DNA mismatch repair protein MutT {ECO:0000313|EMBL:KHK96641.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
nudix hydrolase
SCN18_25_8_15_R2_B_scaffold_3447_10
unknown

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8806..8994
DNA (189bp) protein (63aa)

This feature has no annotations

Displaying 13 items

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