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SCN18_25_8_15_R2_B_scaffold_1643

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1643_1
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(1..282)
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037E0960
Short chain dehydrogenase {ECO:0000313|EMBL:EZP27782.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
short chain dehydrogenase
SCN18_25_8_15_R2_B_scaffold_1643_2
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

369..2153
DNA (1785bp) protein (595aa)
glycoside hydrolase n=1 Tax=Curtobacterium sp. B8 RepID=UPI00034642E3
glucoamylase
Glycosyl hydrolase, glucoamylase {ECO:0000313|EMBL:ACZ23608.1}; TaxID=446469 species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" source="Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 /; ST-74).;"
SCN18_25_8_15_R2_B_scaffold_1643_3
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(2160..2711)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI000377EB9F
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EWC60265.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
TetR family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_1643_4
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

2807..3535
DNA (729bp) protein (243aa)
FabG n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B56E7C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH99561.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
SCN18_25_8_15_R2_B_scaffold_1643_5
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(3886..5211)
DNA (1326bp) protein (442aa)
fuconate dehydratase n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00036320EC
L-alanine-DL-glutamate epimerase
L-alanine-DL-glutamate epimerase {ECO:0000313|EMBL:BAJ75538.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCN18_25_8_15_R2_B_scaffold_1643_6
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(5220..6848)
DNA (1629bp) protein (543aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI000379FEE5
Glycoside hydrolase family 39 {ECO:0000313|EMBL:ETK36698.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
glycoside hydrolase family protein
SCN18_25_8_15_R2_B_scaffold_1643_7
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(6898..10158)
DNA (3261bp) protein (1087aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=1515610 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" source="Prauserella sp. Am3.;"
Extracellular beta-galactosidase, ricinB domains n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0L7T7_9ACTO
BgaM
SCN18_25_8_15_R2_B_scaffold_1643_8
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(10163..10576)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Microbacteriaceae RepID=UPI000368B6D6
transport protein RbsD/FucU
RbsD or FucU transport {ECO:0000313|EMBL:ABS05033.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
SCN18_25_8_15_R2_B_scaffold_1643_9
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(10573..11628)
DNA (1056bp) protein (352aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00037742E2
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:ABS05034.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
SCN18_25_8_15_R2_B_scaffold_1643_10
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(11652..13202)
DNA (1551bp) protein (517aa)
alpha-L-fucosidase (EC:3.2.1.51)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00036A3432
Alpha-L-fucosidase {ECO:0000313|EMBL:EZP27623.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
SCN18_25_8_15_R2_B_scaffold_1643_11
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(13223..14092)
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Microbacteriaceae RepID=UPI000379FA83
Contig_27, whole genome shotgun sequence {ECO:0000313|EMBL:KIP89788.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
ABC transporter permease
SCN18_25_8_15_R2_B_scaffold_1643_12
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(14085..15044)
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Microbacteriaceae RepID=UPI000377F48E
Contig_27, whole genome shotgun sequence {ECO:0000313|EMBL:KIP89789.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
ABC transporter permease
SCN18_25_8_15_R2_B_scaffold_1643_13
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(15041..16312)
DNA (1272bp) protein (424aa)
hypothetical protein n=1 Tax=Microbacteriaceae RepID=UPI000374611F
ABC transporter substrate-binding protein
ABC transporter, solute-binding protein {ECO:0000313|EMBL:AFN46272.1}; TaxID=767029 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium propionicum (strain F0230a).;"
SCN18_25_8_15_R2_B_scaffold_1643_14
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(16382..17392)
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Microbacteriaceae RepID=UPI00035DA536
dehydrogenase
Dehydrogenase {ECO:0000313|EMBL:AHF90431.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
SCN18_25_8_15_R2_B_scaffold_1643_15
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(17389..18222)
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Microbacteriaceae RepID=UPI000373661B
Xylose isomerase domain-containing protein TIMbarrel {ECO:0000313|EMBL:CDR17165.1}; TaxID=576784 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces iranensis.;"
aromatic ring-opening dioxygenase LigA
SCN18_25_8_15_R2_B_scaffold_1643_16
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

18317..19267
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Microbacteriaceae RepID=UPI00035D0658
SCE134.07; LacI family transcriptional regulator
LacI family transcriptional regulator {ECO:0000313|EMBL:ESQ05626.1}; TaxID=1223307 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PVA 94-07.;"
Displaying 16 items

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