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SCN18_25_8_15_R2_B_scaffold_2381

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_2381_1
SCNpilot_P_inoc_Microbacterium_67_17, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(1..615)
DNA (615bp) protein (205aa)
30S ribosomal protein S3 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E518_9MICO
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
rpsC; 30S ribosomal protein S3
SCN18_25_8_15_R2_B_scaffold_2381_2
CN-SCN_Microbacterium_200x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(615..1007)
DNA (393bp) protein (131aa)
50S ribosomal protein L22 n=1 Tax=Microbacterium barkeri RepID=UPI000310EAC9
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
rplV; 50S ribosomal protein L22
SCN18_25_8_15_R2_B_scaffold_2381_3
SCNpilot_P_inoc_Microbacterium_67_17, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(1030..1311)
DNA (282bp) protein (94aa)
30S ribosomal protein S19 n=1 Tax=Microbacterium barkeri RepID=UPI000373FC1F
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
rpsS; ribosomal protein S19
SCN18_25_8_15_R2_B_scaffold_2381_4
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(1325..2164)
DNA (840bp) protein (280aa)
50S ribosomal protein L2 n=2 Tax=Microbacterium RepID=H8E521_9MICO
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
rplB; ribosomal protein L2
SCN18_25_8_15_R2_B_scaffold_2381_5
Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2190..2489)
DNA (300bp) protein (100aa)
50S ribosomal protein L23 n=1 Tax=Microbacterium sp. B19 RepID=UPI00034C28DE
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
rplW; ribosomal protein L23
SCN18_25_8_15_R2_B_scaffold_2381_6
Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2486..3148)
DNA (663bp) protein (221aa)
50S ribosomal protein L4 n=1 Tax=Microbacterium RepID=UPI00037E0868
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
rplD; ribosomal protein L4
SCN18_25_8_15_R2_B_scaffold_2381_7
Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3151..3810)
DNA (660bp) protein (220aa)
50S ribosomal protein L3 n=1 Tax=Microbacterium yannicii RepID=UPI0002DA5EFE
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
rplC; 50S ribosomal protein L3
SCN18_25_8_15_R2_B_scaffold_2381_8
Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3819..4127)
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NF35_MICTS
rpsJ; ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCN18_25_8_15_R2_B_scaffold_2381_9
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(4592..4807)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ABF9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KIC59319.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2381_10
Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4883..5857)
DNA (975bp) protein (325aa)
sugar ABC transporter permease n=1 Tax=Microbacterium sp. B19 RepID=UPI000349450D
L-arabinose transport system permease protein AraQ {ECO:0000313|EMBL:KJL36829.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
sugar ABC transporter permease
SCN18_25_8_15_R2_B_scaffold_2381_11
Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5857..7209)
DNA (1353bp) protein (451aa)
ABC-type sugar transport systems, permease components n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N6T7_MICTS
Lactose transport system permease protein LacF {ECO:0000313|EMBL:KJL31224.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
sugar ABC transporter permease
SCN18_25_8_15_R2_B_scaffold_2381_12
Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(7330..8658)
DNA (1329bp) protein (443aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N6T6_MICTS
Multiple sugar-binding protein {ECO:0000313|EMBL:KJL36831.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
sugar ABC transporter periplasmic protein
SCN18_25_8_15_R2_B_scaffold_2381_13
CN-SCN_Microbacterium_27x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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8951..10018
DNA (1068bp) protein (356aa)
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E6E4_9MICO
Transcriptional regulator {ECO:0000313|EMBL:KIC59908.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_2381_14
Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(10085..11278)
DNA (1194bp) protein (398aa)
elongation factor Tu n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003725B7B
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
GTPase - translation elongation factors
SCN18_25_8_15_R2_B_scaffold_2381_15
Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(11437..13251)
DNA (1815bp) protein (605aa)
elongation factor G n=1 Tax=Microbacterium yannicii RepID=UPI0002F10535
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
fusA; translation elongation factors
Displaying 15 items

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