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SCN18_25_8_15_R2_B_scaffold_4131

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_4131_1
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..432)
DNA (432bp) protein (144aa)
RNA polymerase, sigma subunit, ECF family n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RJH5_BLASD
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR66840.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
RNA polymerase, sigma subunit, ECF family
SCN18_25_8_15_R2_B_scaffold_4131_2
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(545..1387)
DNA (843bp) protein (281aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BV20_BEUC1
Binding-protein-dependent transport system inner membrane protein {ECO:0000313|EMBL:KGA19786.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
binding-protein-dependent transport system inner membrane protein
SCN18_25_8_15_R2_B_scaffold_4131_3
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1389..2324)
DNA (936bp) protein (312aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BV19_BEUC1
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACQ78393.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCN18_25_8_15_R2_B_scaffold_4131_4
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2321..3670)
DNA (1350bp) protein (450aa)
Extracellular solute-binding protein family 1 n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BV18_BEUC1
Uncharacterized protein {ECO:0000313|EMBL:KGA19784.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
family 1 extracellular solute-binding protein
SCN18_25_8_15_R2_B_scaffold_4131_5
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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4096..5394
DNA (1299bp) protein (433aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BV15_BEUC1
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:KGA19783.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
mandelate racemase/muconate lactonizing protein
SCN18_25_8_15_R2_B_scaffold_4131_6
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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5428..6195
DNA (768bp) protein (256aa)
Regulatory protein GntR HTH n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BV14_BEUC1
GntR family transcriptional regulator
Regulatory protein GntR HTH {ECO:0000313|EMBL:ACQ78388.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCN18_25_8_15_R2_B_scaffold_4131_7
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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6199..7206
DNA (1008bp) protein (336aa)
Uncharacterized protein {ECO:0000313|EMBL:KGA19781.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
SCN18_25_8_15_R2_B_scaffold_4131_8
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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7203..7379
DNA (177bp) protein (59aa)
Putative 3-alpha-hydroxysteroid dehydrogenase reductase n=1 Tax=Streptomyces aurantiacus JA 4570 RepID=S4AQ71_9ACTO
Putative 3-alpha-hydroxysteroid dehydrogenase reductase {ECO:0000313|EMBL:EPH43597.1}; TaxID=1286094 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces aurantiacus JA 4570.;"
oxidoreductase
Displaying 8 items

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