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SCN18_25_8_15_R2_B_scaffold_3080

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_3080_1
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..684)
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Kushneria aurantia RepID=UPI000379920B
ABC transporter {ECO:0000313|EMBL:KFF49881.1}; TaxID=1492922 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MFB021.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_3080_2
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(681..1652)
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI0003764B08
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:KFF49882.1}; TaxID=1492922 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MFB021.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_3080_3
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1652..2566)
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Kushneria aurantia RepID=UPI00036331CC
ABC transporter permease {ECO:0000313|EMBL:KFF49883.1}; TaxID=1492922 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MFB021.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_3080_4
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2641..3750)
DNA (1110bp) protein (370aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI00035DA03E
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFF49884.1}; TaxID=1492922 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MFB021.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_3080_5
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3874..4611
DNA (738bp) protein (246aa)
Transcriptional regulator, GntR family n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11F72_MESSB
AsnC family transcriptional regulator {ECO:0000313|EMBL:KKB07080.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
GntR family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_3080_6
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4772..5866
DNA (1095bp) protein (365aa)
UPI0003CE3848 related cluster n=1 Tax=unknown RepID=UPI0003CE3848
Oxidoreductase {ECO:0000313|EMBL:ESW87647.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
oxidoreductase
SCN18_25_8_15_R2_B_scaffold_3080_7
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6126..7163
DNA (1038bp) protein (346aa)
Response regulator n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBL2_PELHB
Transcriptional regulator {ECO:0000313|EMBL:KKB84164.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
Response regulator
SCN18_25_8_15_R2_B_scaffold_3080_8
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7601..7933
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0EQG2_CAUCE
Uncharacterized protein {ECO:0000313|EMBL:ENZ83242.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
sulfate transporter
SCN18_25_8_15_R2_B_scaffold_3080_9
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7930..8298
DNA (369bp) protein (123aa)
Chemotaxis regulator-transmits chemoreceptor signals to flagelllar motor components CheY n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBL4_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL32150.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY
SCN18_25_8_15_R2_B_scaffold_3080_10
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8295..10379
DNA (2085bp) protein (695aa)
Signal transduction histidine kinase CheA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBL5_PELHB
Chemotaxis protein CheA {ECO:0000313|EMBL:KKC33299.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
signal transduction histidine kinase CheA
SCN18_25_8_15_R2_B_scaffold_3080_11
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10376..10870
DNA (495bp) protein (165aa)
Positive regulator of CheA protein activity (CheW) n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBL6_PELHB
Chemotaxis protein CheW {ECO:0000313|EMBL:KKB84168.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
Positive regulator of CheA protein activity (CheW)
SCN18_25_8_15_R2_B_scaffold_3080_12
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10867..12225
DNA (1359bp) protein (453aa)
Methyl-accepting chemotaxis receptor (MCP) n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBL7_PELHB
methyl-accepting chemotaxis receptor (MCP)
Methyl-accepting chemotaxis receptor (MCP) {ECO:0000313|EMBL:AEQ53658.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
Displaying 12 items

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