ggKbase home page

SCN18_25_8_15_R2_B_scaffold_3321

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_3321_1
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

140..523
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BHF9_9RHIZ
Glyoxalase-like domain protein {ECO:0000313|EMBL:CEJ14560.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_3321_2
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

510..1007
DNA (498bp) protein (166aa)
Gfa-like protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RF60_PELHB
Aldehyde-activating protein {ECO:0000313|EMBL:KFL29315.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Gfa-like protein
SCN18_25_8_15_R2_B_scaffold_3321_3
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1004..1966
DNA (963bp) protein (321aa)
pip-1; proline iminopeptidase 1 (EC:3.4.11.5)
Proline iminopeptidase {ECO:0000256|RuleBase:RU003421}; EC=3.4.11.5 {ECO:0000256|RuleBase:RU003421};; TaxID=347834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CFN 42 / ATCC 51251).;"
Proline iminopeptidase n=2 Tax=Rhizobium etli RepID=Q2KAB3_RHIEC
SCN18_25_8_15_R2_B_scaffold_3321_4
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1963..2466
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RF61_PELHB
Glutathione-dependent formaldehyde-activating GFA {ECO:0000313|EMBL:KFC71242.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_3321_5
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2477..4069
DNA (1593bp) protein (531aa)
(R)-citramalate synthase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RF64_PELHB
Transferase {ECO:0000313|EMBL:KKB82662.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
(R)-citramalate synthase
SCN18_25_8_15_R2_B_scaffold_3321_6
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4183..5805
DNA (1623bp) protein (541aa)
Peptidoglycan-binding LysM (Fragment) n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HQL7_9RHIZ
Peptidoglycan-binding LysM {ECO:0000313|EMBL:EHK56994.1}; Flags: Fragment;; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
LysM domain-containing protein
SCN18_25_8_15_R2_B_scaffold_3321_7
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5970..6296
DNA (327bp) protein (109aa)
Transcriptional regulator, ArsR family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RF66_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL28216.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
ArsR family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_3321_8
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6296..8194
DNA (1899bp) protein (633aa)
ABC transporter HlyB/MsbA family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RF67_PELHB
Metal ABC transporter permease {ECO:0000313|EMBL:KKB10746.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
ABC transporter HlyB/MsbA family
SCN18_25_8_15_R2_B_scaffold_3321_9
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8390..9346
DNA (957bp) protein (319aa)
Alanine racemase n=1 Tax=Streptococcus equi subsp. zooepidemicus S31A1 RepID=T0JPV0_STRSZ
alr; alanine racemase
Alr_1 protein {ECO:0000313|EMBL:KIS19466.1}; TaxID=1381082 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus equi subsp. zooepidemicus Sz4is.;"
SCN18_25_8_15_R2_B_scaffold_3321_10
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9295..9435
DNA (141bp) protein (47aa)
Displaying 10 items

View Taxonomy