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SCN18_25_8_15_R2_B_scaffold_3578

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_3578_1
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..677
DNA (675bp) protein (225aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB76367.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
SCN18_25_8_15_R2_B_scaffold_3578_2
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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814..1983
DNA (1170bp) protein (390aa)
MFS transporter n=1 Tax=Mesorhizobium sp. LNJC380A00 RepID=V7GIJ3_9RHIZ
MFS transporter {ECO:0000313|EMBL:KFL26648.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
major facilitator transporter
SCN18_25_8_15_R2_B_scaffold_3578_3
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1983..3167
DNA (1185bp) protein (395aa)
major facilitator transporter n=1 Tax=Rhizobium gallicum RepID=UPI0003826910
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACS56832.1}; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM1325).;"
SCN18_25_8_15_R2_B_scaffold_3578_4
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3160..3621
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA36_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB13737.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_3578_5
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3629..4768
DNA (1140bp) protein (380aa)
hypothetical protein n=1 Tax=Wenxinia marina RepID=UPI00037E01C6
Uncharacterized protein {ECO:0000313|EMBL:KKB76371.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
major facilitator superfamily (MFS) transporter
SCN18_25_8_15_R2_B_scaffold_3578_6
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4826..6496)
DNA (1671bp) protein (557aa)
Metallo-beta-lactamase family protein, RNA-specific n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8J0_PELHB
Metallo-beta-lactamase family protein, RNA-specif ic {ECO:0000313|EMBL:CDP52087.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
metallo-beta-lactamase family protein, RNA-specific
SCN18_25_8_15_R2_B_scaffold_3578_7
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6539..7090)
DNA (552bp) protein (184aa)
DNA binding response regulator PrrA (RegA) n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8J1_PELHB
Chemotaxis protein CheY {ECO:0000313|EMBL:KKB76372.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
DNA binding response regulator PrrA (RegA)
SCN18_25_8_15_R2_B_scaffold_3578_8
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7140..8540)
DNA (1401bp) protein (467aa)
Sensor histidine kinase PrrB (RegB) n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8J2_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKC34488.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
sensor histidine kinase PrrB (RegB)
SCN18_25_8_15_R2_B_scaffold_3578_9
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8741..9184
DNA (444bp) protein (148aa)
Putative transmembrane protein n=1 Tax=uncultured bacterium 1062 RepID=B8R8Z4_9BACT
Putative transmembrane protein {ECO:0000313|EMBL:ACF98150.1}; TaxID=548898 species="Bacteria; environmental samples.;" source="uncultured bacterium 1062.;"
putative cytosolic protein
SCN18_25_8_15_R2_B_scaffold_3578_10
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9278..10024
DNA (747bp) protein (249aa)
Putative zinc metallopeptidase n=1 Tax=uncultured bacterium 1062 RepID=B8R8Z3_9BACT
Putative zinc metallopeptidase {ECO:0000313|EMBL:ACF98149.1}; TaxID=548898 species="Bacteria; environmental samples.;" source="uncultured bacterium 1062.;"
zinc metalloprotease
SCN18_25_8_15_R2_B_scaffold_3578_11
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10161..10538)
DNA (378bp) protein (126aa)
SCN18_25_8_15_R2_B_scaffold_3578_12
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10595..12766)
DNA (2172bp) protein (724aa)
Putative penicillin-binding protein 1A n=1 Tax=uncultured bacterium 1062 RepID=B8R8Z2_9BACT
Putative penicillin-binding protein 1A {ECO:0000313|EMBL:ACF98148.1}; TaxID=548898 species="Bacteria; environmental samples.;" source="uncultured bacterium 1062.;"
multimodular transpeptidase-transglycosylase
SCN18_25_8_15_R2_B_scaffold_3578_13
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12988..15441)
DNA (2454bp) protein (818aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
DNA gyrase subunit B n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8K0_PELHB
DNA gyrase subunit B
SCN18_25_8_15_R2_B_scaffold_3578_14
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15550..15888)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI0003609694
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
DNA recombination and repair protein RecF
Displaying 14 items

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