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SCN18_25_8_15_R2_B_scaffold_1005

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1005_1
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..159
DNA (159bp) protein (53aa)
ABC transporter with duplicated ATPase domains n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T9Q6_9BRAD
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:KFC61353.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
ABC transporter-like protein
SCN18_25_8_15_R2_B_scaffold_1005_2
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

421..1452
DNA (1032bp) protein (344aa)
Aryl-alcohol dehydrogenase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LUR3_RHITR
Dehydratase {ECO:0000313|EMBL:KGM31988.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
aldo/keto reductase protein
SCN18_25_8_15_R2_B_scaffold_1005_3
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1557..2621)
DNA (1065bp) protein (355aa)
Putative transcriptional regulator, LacI family n=1 Tax=Rhizobium sp. RepID=L0NIN2_RHISP
Transcriptional regulator, LacI family {ECO:0000313|EMBL:CDP53407.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
aglR; HTH-type transcriptional regulator AglR
SCN18_25_8_15_R2_B_scaffold_1005_4
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3276..3485
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBV6_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB81827.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1005_trna_2
unknown

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comp(3586..3657)
DNA (72bp)
transferRNA Gln
SCN18_25_8_15_R2_B_scaffold_1005_trna_1
unknown

Not on your lists

3829..3902
DNA (74bp)
transferRNA Pro
SCN18_25_8_15_R2_B_scaffold_1005_5
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4004..4684)
DNA (681bp) protein (227aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
ABC transporter (EC:3.6.3.25)
ABC transporter n=1 Tax=Nitratireductor indicus C115 RepID=K2NPR3_9RHIZ
SCN18_25_8_15_R2_B_scaffold_1005_6
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4681..5889)
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NK71_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKB07575.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1005_7
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5891..6970)
DNA (1080bp) protein (360aa)
Secretion protein HlyD n=1 Tax=Nitratireductor indicus C115 RepID=K2NXM6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKB78397.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
secretion protein HlyD
SCN18_25_8_15_R2_B_scaffold_1005_8
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7055..7681
DNA (627bp) protein (209aa)
Transcriptional regulator, TetR family n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P0K5_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KKB78202.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
TetR-family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_1005_9
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7749..8243)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9DDN3_9RHIZ
Secreted and surface protein {ECO:0000313|EMBL:EDQ32102.1}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrophica DFL-43.;"
Beta-Ig-H3/Fasciclin
SCN18_25_8_15_R2_B_scaffold_1005_10
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8339..9040)
DNA (702bp) protein (234aa)
UPI0003CFB5F5 related cluster n=1 Tax=unknown RepID=UPI0003CFB5F5
Phosphoesterase {ECO:0000313|EMBL:ESZ56507.1}; TaxID=1287089 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C131B0.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1005_11
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9208..10134)
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003602CBF
Ribokinase {ECO:0000313|EMBL:EKS69982.1}; TaxID=406819 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. SJ98.;"
ribokinase
SCN18_25_8_15_R2_B_scaffold_1005_12
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10323..10904)
DNA (582bp) protein (194aa)
Uncharacterized protein n=2 Tax=Ketogulonicigenium vulgare RepID=F9Y9N4_KETVW
ATPase AAA {ECO:0000313|EMBL:KFL28579.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
ATPase AAA
SCN18_25_8_15_R2_B_scaffold_1005_13
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10901..11650)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F3I1_9RHIZ
Cytoplasmic protein {ECO:0000313|EMBL:KFL31084.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1005_14
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11647..12663)
DNA (1017bp) protein (339aa)
LacI transcriptional regulator n=1 Tax=Pseudomonas syringae pv. avellanae str. ISPaVe037 RepID=K2U3Q4_PSESY
Transcriptional regulator, LacI family {ECO:0000313|EMBL:CDP52183.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
LacI transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_1005_15
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12758..14620)
DNA (1863bp) protein (621aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
adenine deaminase (EC:3.5.4.2)
Adenine deaminase 2 n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=ADEC2_BRADU
SCN18_25_8_15_R2_B_scaffold_1005_16
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14650..15381)
DNA (732bp) protein (244aa)
Creatininase n=2 Tax=Ketogulonicigenium vulgare RepID=E3EYB3_KETVY
Creatinine amidohydrolase {ECO:0000313|EMBL:KFL27851.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
creatininase
SCN18_25_8_15_R2_B_scaffold_1005_17
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15381..16334)
DNA (954bp) protein (318aa)
Cytidine deaminase {ECO:0000256|PIRNR:PIRNR006334}; EC=3.5.4.5 {ECO:0000256|PIRNR:PIRNR006334};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
cdd; cytidine deaminase 1, 2, 7 (EC:3.5.4.5)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037C7935
SCN18_25_8_15_R2_B_scaffold_1005_18
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16420..17769
DNA (1350bp) protein (450aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase n=2 Tax=Ketogulonicigenium vulgare RepID=E3EYB5_KETVY
Amidohydrolase {ECO:0000313|EMBL:KKB82520.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
ssnA; amidohydrolase
SCN18_25_8_15_R2_B_scaffold_1005_19
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17717..18718
DNA (1002bp) protein (334aa)
Inosine/uridine-preferring nucleoside hydrolase n=1 Tax=Jannaschia sp. (strain CCS1) RepID=Q28MB3_JANSC
Inosine-uridine preferring nucleoside hydrolase {ECO:0000313|EMBL:KFC66112.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
inosine/uridine-preferring nucleoside hydrolase
SCN18_25_8_15_R2_B_scaffold_1005_20
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18747..19802
DNA (1056bp) protein (352aa)
Basic membrane lipoprotein n=2 Tax=Ketogulonicigenium vulgare RepID=E3EYB7_KETVY
Putative nucleoside ABC transporter, substrate-binding component {ECO:0000313|EMBL:KFC66111.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
basic membrane lipoprotein
SCN18_25_8_15_R2_B_scaffold_1005_21
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19968..21512
DNA (1545bp) protein (515aa)
mglA3; sugar ABC-transporter, ATP-ase component (EC:3.6.3.17)
ABC-type sugar transport system n=2 Tax=Ketogulonicigenium vulgare RepID=E3EYB8_KETVY
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFL27846.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
SCN18_25_8_15_R2_B_scaffold_1005_22
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21509..22636
DNA (1128bp) protein (376aa)
Inner-membrane translocator n=2 Tax=Ketogulonicigenium vulgare RepID=E3EYB9_KETVY
Putative nucleoside ABC transporter, permease 1 component {ECO:0000313|EMBL:KFC66109.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
ABC transporter permease
SCN18_25_8_15_R2_B_scaffold_1005_23
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22633..23577
DNA (945bp) protein (315aa)
ABC transporter permease protein n=1 Tax=Ketogulonicigenium vulgare (strain WSH-001) RepID=F9Y3Q0_KETVW
Putative nucleoside ABC transporter, permease 2 component {ECO:0000313|EMBL:KFC66108.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
ABC transporter permease
SCN18_25_8_15_R2_B_scaffold_1005_24
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23657..24373)
DNA (717bp) protein (239aa)
UPI0003CE96C4 related cluster n=1 Tax=unknown RepID=UPI0003CE96C4
Thiamine biosynthesis protein ThiF {ECO:0000313|EMBL:KKB81859.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
UBA/THIF-type NAD/FAD binding protein
SCN18_25_8_15_R2_B_scaffold_1005_25
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24370..25116)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8L0_PELHB
Putative secreted protein {ECO:0000313|EMBL:KFC68853.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1005_26
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25070..25528)
DNA (459bp) protein (153aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8K9_PELHB
deoxyuridine 5'-triphosphate nucleotidohydrolase
SCN18_25_8_15_R2_B_scaffold_1005_27
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25528..26157)
DNA (630bp) protein (210aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB76388.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
SCN18_25_8_15_R2_B_scaffold_1005_28
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26276..27805)
DNA (1530bp) protein (510aa)
Probable protein kinase UbiB {ECO:0000256|SAAS:SAAS00063507}; EC=2.7.-.- {ECO:0000256|SAAS:SAAS00063486};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
Ubiquinone biosynthesis monooxygenase UbiB n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8K6_PELHB
ubiquinone biosynthesis monooxygenase UbiB
Displaying items 1-30 of 34 in total

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