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SCN18_25_8_15_R2_B_scaffold_1036

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Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1036_1
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..267
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000364CA32
ABC-type amino acid transport system, permease component {ECO:0000313|EMBL:KFC64344.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
ABC-type amino acid transport system, permease component
SCN18_25_8_15_R2_B_scaffold_1036_2
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

335..880
DNA (546bp) protein (182aa)
Protein creA n=1 Tax=Rhizobium sp. RepID=L0NG52_RHISP
Conserved uncharacterized protein CreA {ECO:0000313|EMBL:CDP51741.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
CreA family protein
SCN18_25_8_15_R2_B_scaffold_1036_3
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

993..1181
DNA (189bp) protein (63aa)
SCN18_25_8_15_R2_B_scaffold_1036_4
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1358..1993
DNA (636bp) protein (212aa)
Alkyl hydroperoxide reductase subunit C-like protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RDW4_PELHB
Peroxidase {ECO:0000313|EMBL:KKB06985.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
alkyl hydroperoxide reductase
SCN18_25_8_15_R2_B_scaffold_1036_5
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2048..2314)
DNA (267bp) protein (89aa)
SCN18_25_8_15_R2_B_scaffold_1036_6
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2377..2721)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QH19_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKB06983.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1036_7
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2732..3055)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI00037C4127
Uncharacterized protein {ECO:0000313|EMBL:KFC61345.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1036_trna_1
unknown

Not on your lists

3286..3372
DNA (87bp)
transferRNA Ser
SCN18_25_8_15_R2_B_scaffold_1036_8
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3673..4317
DNA (645bp) protein (215aa)
31 kDa outer-membrane immunogenic protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RCS5_9RHIZ
31 kDa outer-membrane immunogenic protein {ECO:0000313|EMBL:ESR23199.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
outer membrane protein
SCN18_25_8_15_R2_B_scaffold_1036_9
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4378..5688
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0Y5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY19997.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
conserved protein of unknown function
SCN18_25_8_15_R2_B_scaffold_1036_10
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6003..7085)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF142 RepID=J2KZ55_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJJ26502.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1036_11
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7103..8206)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF142 RepID=J1T4D2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJJ26501.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
hydantoinase
SCN18_25_8_15_R2_B_scaffold_1036_12
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8196..9743)
DNA (1548bp) protein (516aa)
Hydantoinase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q982D1_RHILO
hydantoinase
Hydantoinase {ECO:0000313|EMBL:BAB54528.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCN18_25_8_15_R2_B_scaffold_1036_13
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9740..10633)
DNA (894bp) protein (298aa)
Oligopeptide ABC transporter ATP-binding n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q982D0_RHILO
oligopeptide ABC transporter ATP-binding
Oligopeptide ABC transporter ATP-binding {ECO:0000313|EMBL:BAB54529.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCN18_25_8_15_R2_B_scaffold_1036_14
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10630..11475)
DNA (846bp) protein (282aa)
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component n=1 Tax=Rhizobium sp. CF142 RepID=J1SMP3_9RHIZ
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component {ECO:0000313|EMBL:EJJ26498.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
oligopeptide ABC transporter ATP-binding
SCN18_25_8_15_R2_B_scaffold_1036_15
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11475..12362)
DNA (888bp) protein (296aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Rhizobium sp. CF142 RepID=J2KZ50_9RHIZ
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:EJJ26497.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
peptide ABC transporter permease
SCN18_25_8_15_R2_B_scaffold_1036_16
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12364..13386)
DNA (1023bp) protein (341aa)
Dipeptide transport system permease protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q982C7_RHILO
peptide ABC transporter permease
Dipeptide transport system permease protein {ECO:0000313|EMBL:BAB54532.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCN18_25_8_15_R2_B_scaffold_1036_17
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13465..15015)
DNA (1551bp) protein (517aa)
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Rhizobium sp. CF142 RepID=J2AT13_9RHIZ
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:EJJ26495.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
oligopeptide ABC transporter periplasmic oligopeptide-binding protein
SCN18_25_8_15_R2_B_scaffold_1036_18
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15215..17581)
DNA (2367bp) protein (789aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Rhizobium sp. CF142 RepID=J2L0F0_9RHIZ
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:EJJ26494.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
two-component regulator
SCN18_25_8_15_R2_B_scaffold_1036_19
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17729..18673)
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000361D178
Pyridoxal-5'-phosphate-dependent protein beta subunit {ECO:0000313|EMBL:CDX58529.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
pyridoxal-5'-phosphate-dependent protein subunit beta
SCN18_25_8_15_R2_B_scaffold_1036_20
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18670..19677)
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037D999D
Succinylglutamate desuccinylase {ECO:0000313|EMBL:KGM32020.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
succinylglutamate desuccinylase/aspartoacylase
SCN18_25_8_15_R2_B_scaffold_1036_21
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19745..20533)
DNA (789bp) protein (263aa)
Amino acid ABC transporter substrate-binding protein, PAAT family n=1 Tax=Burkholderia vietnamiensis (strain G4 / LMG 22486) RepID=A4JSD3_BURVG
Periplasmic component of amino acid ABC-type transporter/signal transduction system {ECO:0000313|EMBL:KFC75708.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
extracellular solute-binding protein
SCN18_25_8_15_R2_B_scaffold_1036_22
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20565..21296)
DNA (732bp) protein (244aa)
amino acid ABC transporter ATP-binding protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002FE2BCE
ABC-type polar amino acid transport system, ATPase component {ECO:0000313|EMBL:KFC75707.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
amino acid ABC transporter ATP-binding protein
SCN18_25_8_15_R2_B_scaffold_1036_23
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21283..21933)
DNA (651bp) protein (217aa)
Amino acid ABC transporter, permease component n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZIH0_AZOL4
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family {ECO:0000313|EMBL:KFC75706.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Amino acid ABC transporter, permease component
SCN18_25_8_15_R2_B_scaffold_1036_24
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21930..22601)
DNA (672bp) protein (224aa)
Amino acid ABC transporter permease protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IB65_AZOC5
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family {ECO:0000313|EMBL:KFC75705.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
amino acid ABC transporter permease
SCN18_25_8_15_R2_B_scaffold_1036_25
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22718..23476
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000375AB5E
Uncharacterized protein {ECO:0000313|EMBL:KGM32017.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
IclR family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_1036_26
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23473..24633)
DNA (1161bp) protein (387aa)
Xaa-Pro aminopeptidase n=1 Tax=Schlesneria paludicola RepID=UPI00029B553E
Putative peptidase {ECO:0000313|EMBL:CEJ15020.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
creatinase
SCN18_25_8_15_R2_B_scaffold_1036_27
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24633..25808)
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029AD78E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB65461.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCN18_25_8_15_R2_B_scaffold_1036_28
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25894..26484
DNA (591bp) protein (197aa)
TetR family transcriptional regulator n=1 Tax=Oceanibaculum indicum P24 RepID=K2KFE4_9PROT
TetR family transcriptional regulator {ECO:0000313|EMBL:EKE76085.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
TetR family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_1036_29
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26536..26829)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Enterorhabdus caecimuris B7 RepID=R9KXB5_9ACTN
Rhodanese domain-containing protein {ECO:0000313|EMBL:KFE36513.1}; TaxID=1317124 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. 13D2W-2.;"
Rhodanese domain protein
Displaying items 1-30 of 38 in total

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