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SCN18_25_8_15_R2_B_scaffold_1243

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1243_1
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

253..2322
DNA (2070bp) protein (690aa)
Lytic transglycosylase catalytic n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0U7H3_METS4
Lytic transglycosylase catalytic {ECO:0000313|EMBL:KFC71109.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
lytic transglycosylase
SCN18_25_8_15_R2_B_scaffold_1243_2
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2361..3299
DNA (939bp) protein (313aa)
Alpha/beta hydrolase fold protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R612_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL26370.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
alpha/beta hydrolase
SCN18_25_8_15_R2_B_scaffold_1243_3
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3300..4433)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Sagittula stellata E-37 RepID=A3K1D1_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EBA08727.1}; TaxID=388399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sagittula.;" source="Sagittula stellata E-37.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1243_4
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4441..4554)
DNA (114bp) protein (38aa)
SCN18_25_8_15_R2_B_scaffold_1243_5
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4563..7880)
DNA (3318bp) protein (1106aa)
OmpA/MotB n=1 Tax=Ahrensia sp. R2A130 RepID=E0MPS2_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKC32003.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
outer membrane protein and related peptidoglycan-associated (lipo)proteins
SCN18_25_8_15_R2_B_scaffold_1243_6
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8142..9482)
DNA (1341bp) protein (447aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB81098.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
SCN18_25_8_15_R2_B_scaffold_1243_7
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9633..9848
DNA (216bp) protein (72aa)
SCN18_25_8_15_R2_B_scaffold_1243_8
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9797..11557)
DNA (1761bp) protein (587aa)
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit (EC:2.4.1.-)
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit {ECO:0000313|EMBL:AII88011.1}; EC=2.4.1.- {ECO:0000313|EMBL:AII88011.1};; TaxID=666509 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Planktomarina.;" source="Planktomarina temperata RCA23.;"
UPI0003CFE3A8 related cluster n=1 Tax=unknown RepID=UPI0003CFE3A8
SCN18_25_8_15_R2_B_scaffold_1243_9
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11764..12507
DNA (744bp) protein (248aa)
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:CDP50741.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CDP50741.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
3-oxoacyl-ACP reductase n=1 Tax=Amycolatopsis nigrescens RepID=UPI00035F5120
fabG; short-chain dehydrogenase
SCN18_25_8_15_R2_B_scaffold_1243_10
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12776..13486
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LNJC394B00 RepID=V7GBZ6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX47752.1}; TaxID=1287298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC426A00.;"
opacity type porin
SCN18_25_8_15_R2_B_scaffold_1243_11
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13569..14723)
DNA (1155bp) protein (385aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
UPI0003CE8603 related cluster n=1 Tax=unknown RepID=UPI0003CE8603
SCN18_25_8_15_R2_B_scaffold_1243_12
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14825..15865)
DNA (1041bp) protein (347aa)
Glucosamine-6-phosphate deaminase [isomerizing], a lternative {ECO:0000313|EMBL:CDP50743.1}; EC=3.5.99.6 {ECO:0000313|EMBL:CDP50743.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
glucosamine-fructose-6-phosphate aminotransferase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00037C67DF
glucosamine-6-phosphate deaminase
SCN18_25_8_15_R2_B_scaffold_1243_13
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15868..16629)
DNA (762bp) protein (254aa)
UPI0003CEF4D5 related cluster n=1 Tax=unknown RepID=UPI0003CEF4D5
Phage tail protein {ECO:0000313|EMBL:KKB13708.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_1243_14
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16888..17076
DNA (189bp) protein (63aa)
SCN18_25_8_15_R2_B_scaffold_1243_15
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17073..17987
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035DF0FA
N-acetylmuramic acid 6-phosphate etherase
N-acetylmuramic acid 6-phosphate etherase {ECO:0000313|EMBL:AEQ53895.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
SCN18_25_8_15_R2_B_scaffold_1243_16
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18034..19302
DNA (1269bp) protein (423aa)
sugar ABC transporter substrate-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000379B519
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:EEW26522.1}; Flags: Precursor;; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. SW2.;"
sugar ABC transporter substrate-binding protein
SCN18_25_8_15_R2_B_scaffold_1243_17
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19494..20420
DNA (927bp) protein (309aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11EU1_MESSB
binding-protein-dependent transport system inner membrane protein
Carbohydrate ABC transporter membrane protein 1, CUT1 family {ECO:0000313|EMBL:ABG64084.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCN18_25_8_15_R2_B_scaffold_1243_18
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20656..21495
DNA (840bp) protein (280aa)
Sugar ABC transporter permease n=1 Tax=Nitratireductor indicus C115 RepID=K2PN40_9RHIZ
Sugar ABC transporter permease {ECO:0000313|EMBL:EKF42497.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
binding-protein-dependent transport system inner membrane protein
SCN18_25_8_15_R2_B_scaffold_1243_19
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21513..22517
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Brucella melitensis CNGB 1120 RepID=N7LXV1_BRUML
N-Acetyl-D-glucosamine ABC transport system ATP-binding protein
Histidinol-phosphatase {ECO:0000313|EMBL:EPZ76362.1}; TaxID=1351836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella melitensis ADMAS-G1.;"
SCN18_25_8_15_R2_B_scaffold_1243_20
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22582..23403
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000373A777
Amidohydrolase {ECO:0000313|EMBL:KFL32116.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
amidohydrolase
SCN18_25_8_15_R2_B_scaffold_1243_21
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23515..23952
DNA (438bp) protein (146aa)
transporter n=1 Tax=Hoeflea sp. 108 RepID=UPI0003687D22
Transporter {ECO:0000313|EMBL:EXL02555.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1243_22
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23959..24399)
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7PXP9_CATAD
Uncharacterized protein {ECO:0000313|EMBL:CDP53172.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1243_23
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24452..24880)
DNA (429bp) protein (143aa)
CBS domain-containing protein n=2 Tax=Rhizobium etli RepID=S5SKF8_RHIET
CBS domain-containing protein
CBS domain-containing protein {ECO:0000313|EMBL:AJC79673.1}; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. phaseoli str. IE4803.;"
SCN18_25_8_15_R2_B_scaffold_1243_24
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24984..25973)
DNA (990bp) protein (330aa)
Alpha-galactosidase {ECO:0000313|EMBL:CDP53168.1}; EC=3.2.1.22 {ECO:0000313|EMBL:CDP53168.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
Alpha-galactosidase (Melibiase) protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JKW6_AGRRK
agaL2; alpha-galactosidase (melibiase) protein
Displaying 24 items

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