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SCN18_25_8_15_R2_B_scaffold_1378

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_1378_1
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..654
DNA (654bp) protein (218aa)
Cystathionine beta-lyase {ECO:0000313|EMBL:KKB82761.1}; EC=4.4.1.8 {ECO:0000313|EMBL:KKB82761.1};; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
Cystathionine beta-lyase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R831_PELHB
cystathionine beta-lyase
SCN18_25_8_15_R2_B_scaffold_1378_2
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(644..1390)
DNA (747bp) protein (249aa)
Phosphoesterase n=1 Tax=Rhodovulum sp. PH10 RepID=J6UA87_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KFL26250.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
phosphoesterase, PA-phosphatase-like protein
SCN18_25_8_15_R2_B_scaffold_1378_trna_1
unknown

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1468..1541
DNA (74bp)
transferRNA Pro
SCN18_25_8_15_R2_B_scaffold_1378_3
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1560..1865
DNA (306bp) protein (102aa)
Oxidoreductase, putative n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R829_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL26251.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
oxidoreductase
SCN18_25_8_15_R2_B_scaffold_1378_4
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1877..2791
DNA (915bp) protein (305aa)
GumN family protein n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003AA818B
Uncharacterized protein {ECO:0000313|EMBL:KKC39571.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1378_5
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2799..3086)
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6F2Y6_SPHCR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG50798.1}; TaxID=690566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum L-1.;"
SCN18_25_8_15_R2_B_scaffold_1378_6
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3037..3291)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CV49_THIA3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAZ89168.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
SCN18_25_8_15_R2_B_scaffold_1378_7
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3317..4468)
DNA (1152bp) protein (384aa)
Oxidoreductase domain protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R824_PELHB
Oxidoreductase {ECO:0000313|EMBL:KFL31710.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
oxidoreductase domain-containing protein
SCN18_25_8_15_R2_B_scaffold_1378_8
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4622..5677)
DNA (1056bp) protein (352aa)
Inosose isomerase {ECO:0000313|EMBL:CDP53567.1}; EC=5.3.99.- {ECO:0000313|EMBL:CDP53567.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
Inosose isomerase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R823_PELHB
inosose isomerase
SCN18_25_8_15_R2_B_scaffold_1378_9
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5786..6151)
DNA (366bp) protein (122aa)
SCN18_25_8_15_R2_B_scaffold_1378_10
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6186..6572)
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VTE3_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT96507.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCN18_25_8_15_R2_B_scaffold_1378_11
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6733..7200)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HC59_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESZ54050.1}; TaxID=1287086 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C120A0.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1378_12
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7351..8493)
DNA (1143bp) protein (381aa)
Putative oxidoreductase protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R822_PELHB
Oxidoreductase {ECO:0000313|EMBL:KKB82757.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
putative oxidoreductase protein
SCN18_25_8_15_R2_B_scaffold_1378_13
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8498..9241)
DNA (744bp) protein (248aa)
xylose isomerase n=1 Tax=Rhizobium giardinii RepID=UPI000373BA03
Uncharacterized protein {ECO:0000313|EMBL:EGL62952.1}; TaxID=82789 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. ATCC 31749.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1378_14
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9238..10005)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R821_PELHB
Xylose isomerase {ECO:0000313|EMBL:KKB82756.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1378_15
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10129..11202)
DNA (1074bp) protein (358aa)
Transporter of small molecules n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R820_PELHB
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFL26256.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
transporter of small molecules
SCN18_25_8_15_R2_B_scaffold_1378_16
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11205..12107)
DNA (903bp) protein (301aa)
Binding-protein-dependent transporter inner membrane component n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y4Z9_9RHIZ
Sugar ABC transporter permease {ECO:0000313|EMBL:KFL26257.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
binding-protein-dependent transporter inner membrane component
SCN18_25_8_15_R2_B_scaffold_1378_17
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12104..12940)
DNA (837bp) protein (279aa)
Binding-protein-dependent transporter inner membrane component n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y500_9RHIZ
Permease of ABC sugar transporter {ECO:0000313|EMBL:CDP53562.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
binding-protein-dependent transporter inner membrane component
SCN18_25_8_15_R2_B_scaffold_1378_18
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13129..14379)
DNA (1251bp) protein (417aa)
Extracellular solute-binding protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y501_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFL26259.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
extracellular solute-binding protein
SCN18_25_8_15_R2_B_scaffold_1378_19
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14619..15647
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F030D7
Uncharacterized protein {ECO:0000313|EMBL:KFL26260.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
periplasmic binding protein/LacI transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_1378_20
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15740..15982
DNA (243bp) protein (81aa)
SCN18_25_8_15_R2_B_scaffold_1378_trna_2
unknown

Not on your lists

16059..16131
DNA (73bp)
transferRNA Arg
SCN18_25_8_15_R2_B_scaffold_1378_21
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16101..16958
DNA (858bp) protein (286aa)
UPI0003CE280A related cluster n=1 Tax=unknown RepID=UPI0003CE280A
Uncharacterized protein {ECO:0000313|EMBL:ESY72984.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1378_22
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17096..17542)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Kocuria rhizophila RepID=UPI0002E9ED96
Uncharacterized protein {ECO:0000313|EMBL:KKB80940.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1378_23
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17685..18374
DNA (690bp) protein (230aa)
Putative membrane protein hemolysin III-like protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCM0_PELHB
DNA-binding protein {ECO:0000313|EMBL:KKB11536.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
putative membrane protein hemolysin III-like protein
SCN18_25_8_15_R2_B_scaffold_1378_24
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18361..18825)
DNA (465bp) protein (155aa)
Exported protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6L2_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB80942.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_1378_25
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18970..19836
DNA (867bp) protein (289aa)
ATPases of the AAA+ class n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RES4_PELHB
ATPase {ECO:0000313|EMBL:KFL28773.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
ATPase
SCN18_25_8_15_R2_B_scaffold_1378_26
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19894..20820
DNA (927bp) protein (309aa)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
Homoserine O-succinyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RES5_PELHB
homoserine O-succinyltransferase
SCN18_25_8_15_R2_B_scaffold_1378_27
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20916..22370
DNA (1455bp) protein (485aa)
Amino acid regulated cytosolic protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RES7_PELHB
Amino acid regulated cytosolic protein {ECO:0000313|EMBL:KKB10562.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
amino acid regulated cytosolic protein
SCN18_25_8_15_R2_B_scaffold_1378_28
CN-SCN_Devosia_27x, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22367..23398
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RES8_PELHB
Membrane protein {ECO:0000313|EMBL:KKB10563.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein
Displaying 30 items

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